Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq18280 159 9e-37 >seq18280 Length=3810 Score = 159 bits (176), Expect = 9e-37 Identities = 189/252 (75%), Gaps = 13/252 (5%) Strand=Plus/Minus Query 29 TTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGG 88 || |||||||| ||| | ||||||||| | || |||||||||||||| ||| || Sbjct 300 TTTAATTTCACCGAGCTTTAACTGGAGACAGTGGGGCAGTCGTTACGCCATTCATGCGGG 241 Query 89 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGT 148 | ||||||||| | ||| |||||||||||| || ||||||| ||||| || ||||| Sbjct 240 ACAGAACTTACCTGCCAATGAATTTCGCTACTTTCAAACCGTTAGAGTTACAGCTGCCGT 181 Query 149 TTACCGGGGCTTC-GATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGC 207 |||| | |||||| ||| | | || |||| || |||| |||||||| | || Sbjct 180 TTACTGAGGCTTCAGAT---GGGTTT----TTAG----GCCGATCACTTAACCTTGCAGC 132 Query 208 ACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTA 267 || |||||||||||| | |||||| | || ||| |||||||| | ||||||||||| Sbjct 131 ACTGGGCAGGCGTCAGATTCTATAC-TTCATTTTAAATTTTGCAGAATCCTGTGTTTTTA 73 Query 268 ATAAACAGTCGC 279 ||||||||||| Sbjct 72 GTAAACAGTCGC 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260544763648