Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq18280 165 2e-38 >seq18280 Length=3810 Score = 165 bits (182), Expect = 2e-38 Identities = 186/248 (75%), Gaps = 11/248 (4%) Strand=Plus/Minus Query 26 AATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCG 85 |||||||||||| | | ||||||||| | |||||||||| ||| |||||| | Sbjct 297 AATTTCACCGAGCTTTAACTGGAGACAGTGGGGCAGTCGTTACGCCATTCATGCGGGACA 238 Query 86 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTA 145 ||||||||| | ||| |||||||||||| || ||||||| |||||| || |||||||| Sbjct 237 GAACTTACCTGCCAATGAATTTCGCTACTTTCAAACCGTTAGAGTTACAGCTGCCGTTTA 178 Query 146 CTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCG 205 ||| ||||| || | | || | | ||| | ||||||||| |||||| | Sbjct 177 CTGAGGCTTCAGATGGGTTTTTAG---------GCCGAT-CACTTAACCTTGCAGCACTG 128 Query 206 GGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAA 265 |||||||||||| | |||||| || | || | || |||||| ||||||||||| |||| Sbjct 127 GGCAGGCGTCAGATTCTATACTTCAT-TTTAAATTTTGCAGAATCCTGTGTTTTTAGTAA 69 Query 266 ACAGTCGC 273 |||||||| Sbjct 68 ACAGTCGC 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062184927744