Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urostyla_20sp._20PUJRC_5FG1_20[genbank_20GCA_5F001272955.2_202015- 12-23] 20,244 sequences; 42,622,442 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq18143 116 6e-24 seq18280 104 4e-20 >seq18143 Length=555 Score = 116 bits (128), Expect = 6e-24 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| | | |||| ||||||||| |||||| |||||| | |||| || ||||| ||||| Sbjct 410 GAGGCGAGTTTCGCACTTAGATGCTTTCAGCGCTTATCTCATCCACACATAGCTACCCAG 469 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||| ||||||||| ||| || ||| ||||| | |||||||||||||| Sbjct 470 CGATGCCTCTGGCGAAACAACTGGTACACTAGCGGTGTGTCCGACTCGGTCCTCTCGTAC 529 Query 122 TAAGGACAGCTCCTCTCAAATTTC 145 || | |||| || ||||| |||| Sbjct 530 TAGAGTCAGCACCCCTCAATTTTC 553 >seq18280 Length=3810 Score = 104 bits (114), Expect = 4e-20 Identities = 95/118 (81%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| ||||||||| ||||||||| |||||||||| ||| || |||||| || Sbjct 942 GATAGGGACCAAACTGTCTCACGACGTTCTAAACCCAGCTCACGTACCACTTTAACGGCA 883 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCC--CCAGGATGAGACGAGCCGACATCG 275 |||||| || |||||||| | || | || |||||||| || |||||||||||| Sbjct 882 GAACAGGCCGACCCTTGGCAG--ACGATACCCAACCAGGATGTGATGAGCCGACATCG 827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780646874384