Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20astronyxis_20[genbank_20GCA_5F000826245.1_202015-01- 07] 98,248 sequences; 83,432,518 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq97287 143 4e-32 seq31492 140 5e-31 seq48340 138 2e-30 seq48339 138 2e-30 seq42959 138 2e-30 seq30749 138 2e-30 seq68743 136 6e-30 seq67155 136 6e-30 seq96882 134 2e-29 seq10354 114 2e-23 seq7361 109 8e-22 seq48956 107 3e-21 seq34670 107 3e-21 seq4337 104 4e-20 seq13158 96.9 5e-18 seq68519 93.3 6e-17 seq70048 89.7 8e-16 seq22049 89.7 8e-16 seq14851 89.7 8e-16 seq27490 86.0 9e-15 seq25551 78.8 1e-12 seq18914 78.8 1e-12 seq4482 78.8 1e-12 >seq97287 Length=14501 Score = 143 bits (158), Expect = 4e-32 Identities = 119/142 (84%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| ||| || ||||||| |||| |||||| |||||| |||||||| | Sbjct 2052 GTACAAAGGGCAGAGACATAATCAACGCAAGCTA-ATGACTTACGCTTATTAGGAATT-C 1995 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT--CAAAGAT 118 || |||||||| ||| |||| |||||||||||||||| ||| || |||||| ||||||| Sbjct 1994 CTTGTTGAAGATCAATAATTACAATGATCTATCCCCAGCACAATTAAATTTCACAAAGAT 1935 Query 119 TACCCGGACCTGTCGGCCAAGG 140 ||||| ||||| | |||| ||| Sbjct 1934 TACCCAGACCTATTGGCCCAGG 1913 Score = 111 bits (122), Expect = 2e-22 Identities = 75/84 (89%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 |||| || ||| ||||||||||| | |||| |||| ||||||||||||||||||||||| Sbjct 1823 ACTCATTAAATTAATCAGTGTAGCACACGTGTGGCCTAGAACATCTAAGGGCATCACAGA 1764 Query 207 CCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||| || Sbjct 1763 CCTGTTATTGCCTCAAACTTCTGT 1740 >seq31492 Length=127 Score = 140 bits (154), Expect = 5e-31 Identities = 102/115 (89%), Gaps = 4/115 (3%) Strand=Plus/Minus Query 28 CGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGA 87 |||||| |||||||||||||||||||||||| |||||||||||| ||| |||| |||||| Sbjct 127 CGAGCT-GATGACTCGCGCTTACTAGGAATT-CCTCGTTGAAGATCAATAATTACAATGA 70 Query 88 TCTATCCCCATCACGATGAAATTT--CAAAGATTACCCGGACCTGTCGGCCAAGG 140 ||||| |||| |||||| |||||| |||||||||||| ||||| |||||| ||| Sbjct 69 TCTATACCCAGCACGATTAAATTTCACAAAGATTACCCAGACCTATCGGCCCAGG 15 >seq48340 Length=127 Score = 138 bits (152), Expect = 2e-30 Identities = 81/84 (96%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 15 ACTCGTTGAATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGTGCATCACAGA 74 Query 207 CCTGTTATTGCCTCAAACTTCCGT 230 |||||||||||||||||||||||| Sbjct 75 CCTGTTATTGCCTCAAACTTCCGT 98 >seq48339 Length=95 Score = 138 bits (152), Expect = 2e-30 Identities = 79/81 (98%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15 ACTCGTTGAATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 74 Query 207 CCTGTTATTGCCTCAAACTTC 227 ||||||||||||||||||||| Sbjct 75 CCTGTTATTGCCTCAAACTTC 95 >seq42959 Length=127 Score = 138 bits (152), Expect = 2e-30 Identities = 101/114 (89%), Gaps = 4/114 (4%) Strand=Plus/Plus Query 29 GAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGAT 88 ||||| |||||||||||||||||||||||| |||||||||||| ||| |||| ||||||| Sbjct 1 GAGCT-GATGACTCGCGCTTACTAGGAATT-CCTCGTTGAAGATCAATAATTACAATGAT 58 Query 89 CTATCCCCATCACGATGAAATTT--CAAAGATTACCCGGACCTGTCGGCCAAGG 140 ||||| ||| |||||| |||||| |||||||||||| ||||| |||||| ||| Sbjct 59 CTATCACCAGCACGATTAAATTTCACAAAGATTACCCAGACCTATCGGCCCAGG 112 >seq30749 Length=127 Score = 138 bits (152), Expect = 2e-30 Identities = 81/84 (96%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 16 ACTCGTTGAATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAATGGCATCACAGA 75 Query 207 CCTGTTATTGCCTCAAACTTCCGT 230 |||||||||||||||||||||||| Sbjct 76 CCTGTTATTGCCTCAAACTTCCGT 99 >seq68743 Length=127 Score = 136 bits (150), Expect = 6e-30 Identities = 97/109 (89%), Gaps = 3/109 (3%) Strand=Plus/Minus Query 34 TGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATC 93 ||||||||||||||||||||||||| |||||||||||| ||| |||| |||||||||||| Sbjct 124 TGATGACTCGCGCTTACTAGGAATT-CCTCGTTGAAGATCAATAATTACAATGATCTATC 66 Query 94 CCCATCACGATGAAATTT--CAAAGATTACCCGGACCTGTCGGCCAAGG 140 | || |||||| |||||| |||||||||||| ||||| |||||| ||| Sbjct 65 CACAGCACGATTAAATTTCACAAAGATTACCCAGACCTATCGGCCCAGG 17 >seq67155 Length=127 Score = 136 bits (150), Expect = 6e-30 Identities = 97/109 (89%), Gaps = 3/109 (3%) Strand=Plus/Minus Query 34 TGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATC 93 ||||||||||||||||||||||||| |||||||||||| ||| |||| |||||||||||| Sbjct 125 TGATGACTCGCGCTTACTAGGAATT-CCTCGTTGAAGATCAATAATTACAATGATCTATC 67 Query 94 CCCATCACGATGAAATTT--CAAAGATTACCCGGACCTGTCGGCCAAGG 140 || | |||||| |||||| |||||||||||| ||||| |||||| ||| Sbjct 66 CCAAGCACGATTAAATTTCACAAAGATTACCCAGACCTATCGGCCCAGG 18 >seq96882 Length=10023 Score = 134 bits (148), Expect = 2e-29 Identities = 117/142 (82%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| |||| || |||| | |||| |||||| | ||||||||||||| | Sbjct 8645 GTACAAAGGGCAAGGACATAATCAATGTAAGCTA-ATGACTTGTACTTACTAGGAATT-C 8588 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT--CAAAGAT 118 || |||||||| ||| |||| |||||||||||||||| || ||| |||||| ||||||| Sbjct 8587 CTTGTTGAAGATCAATAATTACAATGATCTATCCCCAGCATGATTAAATTTCACAAAGAT 8528 Query 119 TACCCGGACCTGTCGGCCAAGG 140 ||||| ||||| || ||| ||| Sbjct 8527 TACCCAGACCTATCAGCCCAGG 8506 Score = 107 bits (118), Expect = 3e-21 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||| ||||||| ||||||||||| | ||| ||| ||||||||||||||||||||||| Sbjct 8416 ACTTGTTGAATTAATCAGTGTAGCATACATGCAGCCTAGAACATCTAAGGGCATCACAGA 8357 Query 207 CCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||| || Sbjct 8356 CCTGTTATTGCCTCAAACTTCTGT 8333 >seq10354 Length=127 Score = 114 bits (126), Expect = 2e-23 Identities = 65/66 (98%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 68 Query 225 TTCCGT 230 ||| || Sbjct 67 TTCAGT 62 >seq7361 Length=127 Score = 109 bits (120), Expect = 8e-22 Identities = 73/79 (92%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct 77 GTACAAAGGGCAGTGACGTAATCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTC 20 Query 61 CTCGTTGAAGACCAACAAT 79 ||||||||||| ||| ||| Sbjct 19 CTCGTTGAAGATCAATAAT 1 >seq48956 Length=127 Score = 107 bits (118), Expect = 3e-21 Identities = 72/78 (92%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct 52 GTACAAAGGGCATGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTC 109 Query 61 CTCGTTGAAGACCAACAA 78 ||||||||||| ||| || Sbjct 110 CTCGTTGAAGATCAATAA 127 >seq34670 Length=76 Score = 107 bits (118), Expect = 3e-21 Identities = 72/78 (92%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 15 GACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCA 74 |||||| |||||||||||| |||||||||||||||||||||||| |||||||||||| || Sbjct 76 GACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-CCTCGTTGAAGATCA 19 Query 75 ACAATTGCAATGATCTAT 92 | |||| ||||||||||| Sbjct 18 ATAATTACAATGATCTAT 1 >seq4337 Length=127 Score = 104 bits (114), Expect = 4e-20 Identities = 67/71 (94%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct 57 GTACAAATGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTC 114 Query 61 CTCGTTGAAGA 71 ||||||||||| Sbjct 115 CTCGTTGAAGA 125 >seq13158 Length=127 Score = 96.9 bits (106), Expect = 5e-18 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT--CAAAGAT 118 ||||||||||| ||| |||| |||||||||||||||| |||||| |||||| ||||||| Sbjct 127 CTCGTTGAAGATCAATAATTACAATGATCTATCCCCAGCACGATTAAATTTCACAAAGAT 68 Query 119 TACCCGGACCTGTCGGCCAAGG 140 ||| | ||||| |||||| ||| Sbjct 67 TACACAGACCTATCGGCCCAGG 46 >seq68519 Length=127 Score = 93.3 bits (102), Expect = 6e-17 Identities = 56/58 (97%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 69 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTACTAGGAATT 125 >seq70048 Length=90 Score = 89.7 bits (98), Expect = 8e-16 Identities = 66/76 (87%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 67 GAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT--CAAAGATTACCCG 124 ||||| ||| |||| |||||||||||||||| |||||| |||||| |||||||||||| Sbjct 1 GAAGATCAATAATTACAATGATCTATCCCCAGCACGATTAAATTTCACAAAGATTACCCA 60 Query 125 GACCTGTCGGCCAAGG 140 ||||| |||||| ||| Sbjct 61 GACCTATCGGCCCAGG 76 >seq22049 Length=89 Score = 89.7 bits (98), Expect = 8e-16 Identities = 54/56 (96%), Gaps = 1/56 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAA 56 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 35 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA 89 >seq14851 Length=127 Score = 89.7 bits (98), Expect = 8e-16 Identities = 54/56 (96%), Gaps = 1/56 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAA 56 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 73 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA 127 >seq27490 Length=127 Score = 86.0 bits (94), Expect = 9e-15 Identities = 65/76 (86%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 67 GAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT--CAAAGATTACCCG 124 ||||| ||| |||| |||||||||||||||| |||||| |||||| |||||||||||| Sbjct 127 GAAGATCAATAATTACAATGATCTATCCCCAGCACGATTAAATTTCACAAAGATTACCCA 68 Query 125 GACCTGTCGGCCAAGG 140 ||| | |||||| ||| Sbjct 67 GACATATCGGCCCAGG 52 >seq25551 Length=71 Score = 78.8 bits (86), Expect = 1e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 188 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 71 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 29 >seq18914 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 188 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 85 >seq4482 Length=70 Score = 78.8 bits (86), Expect = 1e-12 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 194 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 23 ACTCGTTGAATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751284263320