Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20astronyxis_20[genbank_20GCA_5F000826245.1_202015-01- 07] 98,248 sequences; 83,432,518 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq22049 80.6 2e-13 seq68519 75.2 7e-12 seq48956 75.2 7e-12 seq19223 75.2 7e-12 seq14851 75.2 7e-12 seq7361 75.2 7e-12 seq4337 75.2 7e-12 >seq22049 Length=89 Score = 80.6 bits (88), Expect = 2e-13 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 7 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 64 Query 122 GCT 124 ||| Sbjct 65 GCT 67 >seq68519 Length=127 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||| | |||||||||||||||||||||||| |||||| | Sbjct 41 TTCAATCGGTAGGA-GCGACGGGCTGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 98 Query 122 GCT 124 ||| Sbjct 99 GCT 101 >seq48956 Length=127 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||| ||||||||| |||||| | Sbjct 24 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCATGGACGTAAT-CAACGCGA 81 Query 122 GCT 124 ||| Sbjct 82 GCT 84 >seq19223 Length=127 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 |||| ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 57 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 2 >seq14851 Length=127 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||| ||||| |||||||||||||||||||||||| |||||| | Sbjct 45 TTCAATCGGTAGGA-GCGACTGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 102 Query 122 GCT 124 ||| Sbjct 103 GCT 105 >seq7361 Length=127 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| |||||| | Sbjct 105 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGTGACGTAAT-CAACGCGA 48 Query 122 GCT 124 ||| Sbjct 47 GCT 45 >seq4337 Length=127 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||| |||||||||||||| |||||| | Sbjct 29 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAATGGCAGGGACGTAAT-CAACGCGA 86 Query 122 GCT 124 ||| Sbjct 87 GCT 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300522940640