Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20astronyxis_20[genbank_20GCA_5F000826245.1_202015-01- 07] 98,248 sequences; 83,432,518 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq74624 82.4 8e-14 seq25785 82.4 8e-14 seq68048 78.8 1e-12 seq63587 78.8 1e-12 seq32825 78.8 1e-12 seq8969 78.8 1e-12 seq5102 78.8 1e-12 seq52212 73.4 4e-11 seq51725 73.4 4e-11 seq19598 73.4 4e-11 >seq74624 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 51 GTAATGATTAATATGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 110 Query 183 GGATTTAT 190 |||||||| Sbjct 111 GGATTTAT 118 >seq25785 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 18 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCATAGGTGAAATTCTT 77 Query 183 GGATTTAT 190 |||||||| Sbjct 78 GGATTTAT 85 >seq68048 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||| | ||||||||||||| Sbjct 108 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTAAGAGGTGAAATTCTT 49 Query 183 GGATTTAT 190 |||||||| Sbjct 48 GGATTTAT 41 >seq63587 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| | ||| | | |||| |||||||| ||||||||||||| Sbjct 87 GTAATGATTAATAGGGATAGTTGTGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 28 Query 183 GGATTTAT 190 |||||||| Sbjct 27 GGATTTAT 20 >seq32825 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| | ||||||||||| Sbjct 16 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGATGTGAAATTCTT 75 Query 183 GGATTTAT 190 |||||||| Sbjct 76 GGATTTAT 83 >seq8969 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| || || | | |||| |||||||| ||||||||||||| Sbjct 88 GTAATGATTAATAGGGATAGTTGGTGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 29 Query 183 GGATTTAT 190 |||||||| Sbjct 28 GGATTTAT 21 >seq5102 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| |||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 50 GTAATGATTAATAGTGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 109 Query 183 GGATTTAT 190 |||||||| Sbjct 110 GGATTTAT 117 >seq52212 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||||| Sbjct 65 AATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGG 124 Query 185 ATT 187 ||| Sbjct 125 ATT 127 >seq51725 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||||| Sbjct 65 AATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGG 124 Query 185 ATT 187 ||| Sbjct 125 ATT 127 >seq19598 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 65 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 124 Query 183 GGA 185 ||| Sbjct 125 GGA 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511512689920