Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20astronyxis_20[genbank_20GCA_5F000826245.1_202015-01- 07] 98,248 sequences; 83,432,518 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq48340 145 1e-32 seq30749 143 5e-32 seq97287 136 7e-30 seq10354 136 7e-30 seq31492 129 1e-27 seq68743 127 4e-27 seq67155 127 4e-27 seq48339 127 4e-27 seq42959 127 4e-27 seq96882 125 1e-26 seq7361 114 2e-23 seq48956 113 9e-23 seq34670 111 3e-22 seq4337 105 1e-20 seq18914 95.1 2e-17 seq25551 93.3 8e-17 seq68519 91.5 3e-16 seq22049 86.0 1e-14 seq14851 86.0 1e-14 seq13158 86.0 1e-14 seq35071 82.4 1e-13 seq70048 80.6 5e-13 seq27490 75.2 2e-11 seq95707 73.4 7e-11 >seq48340 Length=127 Score = 145 bits (160), Expect = 1e-32 Identities = 102/115 (89%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 73 TTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| || || | ||| || ||||||||||||||||||||||||||||| Sbjct 127 TTCTTAGAGGGACTGTCTGCGCTTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGA 68 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 ||| ||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 67 TGCACTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATTAATTCAACGAGTTC 13 >seq30749 Length=127 Score = 143 bits (158), Expect = 5e-32 Identities = 101/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 74 TCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||||| || || | ||| || |||||||||||||||||||||||||||||| Sbjct 127 TCTTAGAGGGACTGTCTGCGCTTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGAT 68 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 ||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 67 GCCATTAGATGTTCTGGGCCGCACGCGCGCTACACTGATTAATTCAACGAGTTC 14 >seq97287 Length=14501 Score = 136 bits (150), Expect = 7e-30 Identities = 120/147 (82%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 183 GTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGAT 241 |||| || ||| |||| |||||||||||||||| || ||| | | ||||||||||| Sbjct 1906 GTTCGTC-CCTGGGCCAATAGGTCTGGGTAATCTTTGTGAAATTTAATTGTGCTGGGGAT 1964 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 ||| ||||| |||||||| |||||||| |||||| |||| |||||| ||||| ||| Sbjct 1965 AGATCATTGTAATTATTGATCTTCAACAAGGAATTCCTAATAAGCGTAAGTCATTAGCTT 2024 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| ||| |||||||||||| Sbjct 2025 GCGTTGATTATGTCTCTGCCCTTTGTA 2051 Score = 120 bits (132), Expect = 6e-25 Identities = 88/101 (87%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||||| || | | ||| || |||||||||||||||||||||||||| Sbjct 1709 GCTTCTTAGAGGGACTGTCTGTGCTTAGCAGACAGAAGTTTGAGGCAATAACAGGTCTGT 1768 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||||||| |||| |||| | |||||||||| Sbjct 1769 GATGCCCTTAGATGTTCTAGGCCACACGTGTGCTACACTGA 1809 >seq10354 Length=127 Score = 136 bits (150), Expect = 7e-30 Identities = 89/97 (92%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||||| || || | ||| || |||||||||||||||||||||||||| Sbjct 31 GCTTCTTAGAGGGACTGTCTGCGCTTAGCAGACTGAAGTTTGAGGCAATAACAGGTCTGT 90 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACA 166 ||||||||||||||||||||||||||||||||||||| Sbjct 91 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACA 127 >seq31492 Length=127 Score = 129 bits (142), Expect = 1e-27 Identities = 97/113 (86%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| |||||||||||||||| || ||| | |||||||||| ||||| |||| Sbjct 15 CCTGGGCCGATAGGTCTGGGTAATCTTTGTGAAATTTAATCGTGCTGGGTATAGATCATT 74 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACG 302 | |||||||| ||||||||||||||| ||||||||||||| ||||||||| || Sbjct 75 GTAATTATTGATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCG 127 >seq68743 Length=127 Score = 127 bits (140), Expect = 4e-27 Identities = 95/110 (86%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| |||||||||||||||| || ||| | |||||||| ||||||| |||| Sbjct 17 CCTGGGCCGATAGGTCTGGGTAATCTTTGTGAAATTTAATCGTGCTGTGGATAGATCATT 76 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 | |||||||| ||||||||||||||| ||||||||||||| ||||||||| Sbjct 77 GTAATTATTGATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGC 126 >seq67155 Length=127 Score = 127 bits (140), Expect = 4e-27 Identities = 95/110 (86%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| |||||||||||||||| || ||| | ||||||| |||||||| |||| Sbjct 18 CCTGGGCCGATAGGTCTGGGTAATCTTTGTGAAATTTAATCGTGCTTGGGATAGATCATT 77 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 | |||||||| ||||||||||||||| ||||||||||||| ||||||||| Sbjct 78 GTAATTATTGATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGC 127 >seq48339 Length=95 Score = 127 bits (140), Expect = 4e-27 Identities = 78/83 (94%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 104 GAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCT 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 GAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCT 36 Query 164 ACACTGACAGAGCCAACGAGTTC 186 ||||||| | |||||||||| Sbjct 35 ACACTGATTAATTCAACGAGTTC 13 >seq42959 Length=127 Score = 127 bits (140), Expect = 4e-27 Identities = 95/110 (86%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| |||||||||||||||| || ||| | ||||||||| |||||| |||| Sbjct 112 CCTGGGCCGATAGGTCTGGGTAATCTTTGTGAAATTTAATCGTGCTGGTGATAGATCATT 53 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 | |||||||| ||||||||||||||| ||||||||||||| ||||||||| Sbjct 52 GTAATTATTGATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGC 3 >seq96882 Length=10023 Score = 125 bits (138), Expect = 1e-26 Identities = 112/139 (81%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||| | |||||||||||||||| || ||| | || ||||||||||||| |||| Sbjct 8506 CCTGGGCTGATAGGTCTGGGTAATCTTTGTGAAATTTAATCATGCTGGGGATAGATCATT 8565 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||||||| |||||||| |||||| ||||||||| | ||||| ||| | ||||| Sbjct 8566 GTAATTATTGATCTTCAACAAGGAATTCCTAGTAAGTACAAGTCATTAGCTTACATTGAT 8625 Query 310 TACGTCCCTGCCCTTTGTA 328 || |||| ||||||||||| Sbjct 8626 TATGTCCTTGCCCTTTGTA 8644 Score = 113 bits (124), Expect = 9e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||| |||| || || | ||| || |||||||||||||||||||||||||| Sbjct 8302 GCTTCTTAGAGAGACTGTCTGCACTTAGCAGACAGAAGTTTGAGGCAATAACAGGTCTGT 8361 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 |||||||||||||||||| ||| ||| | |||||||||| | |||| ||||| Sbjct 8362 GATGCCCTTAGATGTTCTAGGCTGCATGTATGCTACACTGATTAATTCAACAAGTTC 8418 >seq7361 Length=127 Score = 114 bits (126), Expect = 2e-23 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||||| Sbjct 1 ATTATTGATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC 60 Query 313 GTCCCTGCCCTTTGTA 328 ||| |||||||||||| Sbjct 61 GTCACTGCCCTTTGTA 76 >seq48956 Length=127 Score = 113 bits (124), Expect = 9e-23 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 |||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| Sbjct 127 TTATTGATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACG 68 Query 314 TCCCTGCCCTTTGTA 328 ||| ||||||||||| Sbjct 67 TCCATGCCCTTTGTA 53 >seq34670 Length=76 Score = 111 bits (122), Expect = 3e-22 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 240 ATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 ||||| ||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||| Sbjct 1 ATAGATCATTGTAATTATTGATCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGC 60 Query 300 ACGCGTTGATTACGTC 315 ||||||||||||||| Sbjct 61 TCGCGTTGATTACGTC 76 >seq4337 Length=127 Score = 105 bits (116), Expect = 1e-20 Identities = 64/68 (94%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 125 TCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGC 66 Query 321 CCTTTGTA 328 | |||||| Sbjct 65 CATTTGTA 58 >seq18914 Length=127 Score = 95.1 bits (104), Expect = 2e-17 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||| ||||| || || | ||| || ||||||||||||||||||||||||||| Sbjct 54 GCTTCTTAGATGGACTGTCTGCGCTTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGT 113 Query 130 GATGCCCTTAGATG 143 |||||||||||||| Sbjct 114 GATGCCCTTAGATG 127 >seq25551 Length=71 Score = 93.3 bits (102), Expect = 8e-17 Identities = 64/71 (90%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||||| || || | ||| || |||||||||||||||||||||||||||||| Sbjct 1 TCTTAGAGGGACTGTCTGCGCTTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGAT 60 Query 133 GCCCTTAGATG 143 ||||||||||| Sbjct 61 GCCCTTAGATG 71 >seq68519 Length=127 Score = 91.5 bits (100), Expect = 3e-16 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 271 GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 127 GGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 70 >seq22049 Length=89 Score = 86.0 bits (94), Expect = 1e-14 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 87 CCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 36 >seq14851 Length=127 Score = 86.0 bits (94), Expect = 1e-14 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 125 CCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 74 >seq13158 Length=127 Score = 86.0 bits (94), Expect = 1e-14 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| ||||||| |||||||| || ||| | |||||||||||||||| |||| Sbjct 46 CCTGGGCCGATAGGTCTGTGTAATCTTTGTGAAATTTAATCGTGCTGGGGATAGATCATT 105 Query 250 GCAATTATTGCTCTTCAACGAG 271 | |||||||| ||||||||||| Sbjct 106 GTAATTATTGATCTTCAACGAG 127 >seq35071 Length=75 Score = 82.4 bits (90), Expect = 1e-13 Identities = 58/65 (89%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||||| || || | ||| || ||||||||||||||||||||||||||| Sbjct 11 GCTTCTTAGAGGGACTGTCTGCGCTTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGT 70 Query 130 GATGC 134 ||||| Sbjct 71 GATGC 75 >seq70048 Length=90 Score = 80.6 bits (88), Expect = 5e-13 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| |||||||||||||||| || ||| | |||||||||||||||| |||| Sbjct 76 CCTGGGCCGATAGGTCTGGGTAATCTTTGTGAAATTTAATCGTGCTGGGGATAGATCATT 17 Query 250 GCAATTATTGCTCTTC 265 | |||||||| ||||| Sbjct 16 GTAATTATTGATCTTC 1 >seq27490 Length=127 Score = 75.2 bits (82), Expect = 2e-11 Identities = 63/76 (83%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| | |||||||||||||| || ||| | |||||||||||||||| |||| Sbjct 52 CCTGGGCCGATATGTCTGGGTAATCTTTGTGAAATTTAATCGTGCTGGGGATAGATCATT 111 Query 250 GCAATTATTGCTCTTC 265 | |||||||| ||||| Sbjct 112 GTAATTATTGATCTTC 127 >seq95707 Length=3510 Score = 73.4 bits (80), Expect = 7e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 100 GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCT 147 |||| |||||| |||||||||||||||||||||||| ||||||||||| Sbjct 2971 GATGAAAGTTTAAGGCAATAACAGGTCTGTGATGCCTTTAGATGTTCT 2924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946269394944