Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1352 358 1e-96 seq690 138 2e-30 >seq1352 Length=12447 Score = 358 bits (396), Expect = 1e-96 Identities = 244/276 (88%), Gaps = 14/276 (5%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 925 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 984 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 985 TAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGAC 1044 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1045 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 1104 Query 212 TGTGGTAAC-TTTTCTGGCACCTCTAGCCTCAAATTTCGA-------------GGGACTA 257 ||||||||| ||||||| |||||||||| |||||| ||| | ||| Sbjct 1105 TGTGGTAACTTTTTCTGACACCTCTAGCTTCAAATCCCGAAATATAAATAAACGACTCTA 1164 Query 258 AAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||||||||| |||||| |||||||||| Sbjct 1165 AAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 1200 >seq690 Length=13971 Score = 138 bits (152), Expect = 2e-30 Identities = 127/160 (79%), Gaps = 8/160 (5%) Strand=Plus/Minus Query 52 CCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 ||||||||| || |||||||||||||||| |||||| |||||||||| |||||||||| Sbjct 781 CCTGTCTCACAACAGTCTAAACCCAGCTCATGTTCCCCATTAGTGGGTTAACAATCCAAT 722 Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171 |||| ||||||||||| | ||||| || ||||| ||||||| |||||| | Sbjct 721 GCTTGGTGAATTCTGCTTTGCAATGAT-------GCTGACATTGAAGGATTAAAAAGTGA 669 Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || |||||||| || || | |||||||||||||| ||| Sbjct 668 TGTTGCTATGAATGC-TGACCACCACAAGCCAGTTAGCCC 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854387004576