Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000193105.1_202011-03- 22] 1,521 sequences; 46,714,639 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1352 104 4e-20 >seq1352 Length=12447 Score = 104 bits (114), Expect = 4e-20 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || |||||| |||||||| ||| | || | || | |||| Sbjct 876 GTACGAGAGGAACAGTCGA-TTCAGA-TAATTGGTATTTTCCCTTGGCCGAAAGGCCAGT 819 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||||||| |||||||||||||||||||||||| |||||||| ||| | Sbjct 818 GGGGAGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 759 Query 121 G 121 | Sbjct 758 G 758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819187929344