Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000826485.1_202015-01- 07] 221,748 sequences; 115,049,889 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq25167 102 2e-19 seq160909 93.3 1e-16 seq138294 93.3 1e-16 seq65668 93.3 1e-16 seq134124 91.5 4e-16 seq17520 91.5 4e-16 seq108011 87.8 5e-15 seq617 87.8 5e-15 seq51967 86.0 2e-14 seq166550 82.4 2e-13 seq162684 82.4 2e-13 seq110447 82.4 2e-13 seq97778 82.4 2e-13 seq143128 78.8 2e-12 seq18426 78.8 2e-12 seq158449 77.0 8e-12 seq153939 77.0 8e-12 seq87397 77.0 8e-12 seq39165 77.0 8e-12 seq144837 75.2 3e-11 seq119713 75.2 3e-11 seq113493 75.2 3e-11 seq93072 75.2 3e-11 >seq25167 Length=127 Score = 102 bits (112), Expect = 2e-19 Identities = 92/113 (81%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| ||||||||||| |||||||||||| || |||| Sbjct 121 TACTTGAAGGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGTGC 62 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAG 114 ||| |||| ||| | | |||||| |||||| ||||| ||| || |||| |||| Sbjct 61 AAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGGTGGCTTGT-TAAG 10 >seq160909 Length=127 Score = 93.3 bits (102), Expect = 1e-16 Identities = 90/113 (80%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| ||||||||||| |||||||||||| | | || Sbjct 118 TACTTGAAGGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGATAGGGC 59 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAG 114 ||| |||| ||| | | |||||| |||||| ||||| ||| || |||| |||| Sbjct 58 AAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGGTGGCTTGT-TAAG 7 >seq138294 Length=127 Score = 93.3 bits (102), Expect = 1e-16 Identities = 90/113 (80%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| ||||||||||| ||||||||||| || | || Sbjct 13 TACTTGAAGGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACTGAGAGGGC 72 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAG 114 ||| |||| ||| | | |||||| |||||| ||||| ||| || |||| |||| Sbjct 73 AAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGGTGGCTTGT-TAAG 124 >seq65668 Length=127 Score = 93.3 bits (102), Expect = 1e-16 Identities = 90/113 (80%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| ||||||||||| |||||||||||| || || Sbjct 8 TACTTGAAGGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGATGGC 67 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAG 114 ||| |||| ||| | | |||||| |||||| ||||| ||| || |||| |||| Sbjct 68 AAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGGTGGCTTGT-TAAG 119 >seq134124 Length=127 Score = 91.5 bits (100), Expect = 4e-16 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| ||||||||||| ||| |||||||| || | || Sbjct 21 TACTTGAAGGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCTGTAATACGGAGAGGGC 80 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG 105 ||| |||| ||| | | |||||| |||||| ||||| ||| || Sbjct 81 AAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGGTGG 123 >seq17520 Length=127 Score = 91.5 bits (100), Expect = 4e-16 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| ||||||||||| ||| |||||||| || | || Sbjct 21 TACTTGAAGGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCAGTAATACGGAGAGGGC 80 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG 105 ||| |||| ||| | | |||||| |||||| ||||| ||| || Sbjct 81 AAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCGTAGGTGG 123 >seq108011 Length=127 Score = 87.8 bits (96), Expect = 5e-15 Identities = 76/92 (83%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 24 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTG 83 |||||| ||||||||||| |||||||||||| || | ||||| |||| ||| | | |||| Sbjct 2 CTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGCAAGTGTTATTCGCATTGACTG 61 Query 84 GGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAG 114 || |||||| ||||| ||| || |||| |||| Sbjct 62 GGGGTAAAGGGTGCGTAGGTGGCTTGT-TAAG 92 >seq617 Length=127 Score = 87.8 bits (96), Expect = 5e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| ||||| ||||| |||||||||||| || | || Sbjct 97 TACTTGAAGGAGAAGCCCTGACTAACTTCGTGCAAGCAGTCGCGGTAATACGGAGAGGGC 38 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCG 98 ||| |||| ||| | | |||||| |||||| ||||| Sbjct 37 AAGTGTTATTCGCATTGACTGGGTGTAAAGGGTGCG 2 >seq51967 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 81/102 (79%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 237 CAAT-GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAG 295 |||| ||||||||| || || ||| |||||| || |||||| ||||| | |||| Sbjct 23 CAATAGGCGAAGGCTGCTATCTATTTTAATACTGACACTGATGCACAAAAGCATAGGGAT 82 Query 296 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||| |||||||||||| | ||||| | |||| Sbjct 83 CAAACAGGATTAGAGACCCTGGTAGTCTATGCCCTGACCGAT 124 >seq166550 Length=127 Score = 82.4 bits (90), Expect = 2e-13 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| | ||||||||| |||||||||||| || | || Sbjct 93 TACTTGAAGGAGAAGCCCTGACTAACTTCATGCCAGCAGTCGCGGTAATACGGAGAGGGC 34 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 ||| |||| ||| | | |||||| |||||| || Sbjct 33 AAGTGTTATTCGCATTGACTGGGTGTAAAGGGT 1 >seq162684 Length=127 Score = 82.4 bits (90), Expect = 2e-13 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 24 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTG 83 |||||| ||||||||||| |||||||||||| || | ||||| |||| ||| | | |||| Sbjct 4 CTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGCAAGTGTTATTCGCATTGACTG 63 Query 84 GGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAG 114 | |||||| ||||| ||| || |||| |||| Sbjct 64 TGTGTAAAGGGTGCGTAGGTGGCTTGT-TAAG 94 >seq110447 Length=127 Score = 82.4 bits (90), Expect = 2e-13 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 24 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTG 83 |||||| ||||||||||| |||||||||||| || | ||||| |||| ||| | | ||| Sbjct 5 CTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGCAAGTGTTATTCGCATTGACTT 64 Query 84 GGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAG 114 || |||||| ||||| ||| || |||| |||| Sbjct 65 GGTGTAAAGGGTGCGTAGGTGGCTTGT-TAAG 95 >seq97778 Length=127 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||| | | |||||| |||||||||| |||||||||||| || | || Sbjct 92 TACTTGAAGGAGAAGCCCTGACTAACTTAGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 33 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAG 92 ||| |||| ||| | | |||||| |||||| Sbjct 32 AAGTGTTATTCGCATTGACTGGGTGTAAAG 3 >seq143128 Length=92 Score = 78.8 bits (86), Expect = 2e-12 Identities = 70/88 (80%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 ||||||||| || || |||||||||| || | |||| ||||| | |||| ||||| Sbjct 5 GGCGAAGGCTGCTATCTATTTTAACACTGACACTGAGGCACAAAAGCATAGGGATCAAAC 64 Query 301 AGGATTAGATACCCTGGTAGTCCACGCC 328 ||||||||| |||||||||||| | ||| Sbjct 65 AGGATTAGAGACCCTGGTAGTCTATGCC 92 >seq18426 Length=127 Score = 78.8 bits (86), Expect = 2e-12 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 31 CGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA 90 ||||||||||| |||||||||||| || | ||||| |||| ||| | | |||||| |||| Sbjct 126 CGTGCCAGCAGTCGCGGTAATACGGAGAGGGCAAGTGTTATTCGCATTGACTGGGTGTAA 67 Query 91 AGCGTGCGCAGGCGG-TTGTGTAAG 114 || ||||| ||| || |||| |||| Sbjct 66 AGTGTGCGTAGGTGGCTTGT-TAAG 43 >seq158449 Length=127 Score = 77.0 bits (84), Expect = 8e-12 Identities = 79/102 (77%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 237 CAAT-GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAG 295 |||| ||||||||| || || ||| |||||| || | |||| ||||| | ||| Sbjct 9 CAATAGGCGAAGGCTGCTATCTATTTTAATACTGACACTGAGGCACAAAAGCATATGGAT 68 Query 296 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||| |||||||||||| | ||||| | |||| Sbjct 69 CAAACAGGATTAGAGACCCTGGTAGTCTATGCCCTGACCGAT 110 >seq153939 Length=127 Score = 77.0 bits (84), Expect = 8e-12 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 ||||||||| || || ||| |||||| || | |||| ||||| | |||| ||||| Sbjct 125 GGCGAAGGCTGCTATCTATTTTAATACTGACACTGAGGCACAAAAGCATAGGGATCAAAC 66 Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | ||||||| |||||||||||| | ||||| | |||| Sbjct 65 ATGATTAGAGACCCTGGTAGTCTATGCCCTGACCGAT 29 >seq87397 Length=127 Score = 77.0 bits (84), Expect = 8e-12 Identities = 65/80 (81%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| ||||| | |||||| | |||||| ||||||||||| |||||||||||| || | || Sbjct 80 TACTTGAAGGAGAAGCACTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 21 Query 63 AAGCGTTAATCGGAATTACT 82 ||| |||| ||| | | ||| Sbjct 20 AAGTGTTATTCGCATTGACT 1 >seq39165 Length=127 Score = 77.0 bits (84), Expect = 8e-12 Identities = 79/102 (77%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 237 CAAT-GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAG 295 |||| ||||||||| || || ||| |||||| || | |||| ||||| | | || Sbjct 8 CAATAGGCGAAGGCTGCTATCTATTTTAATACTGACACTGAGGCACAAAAGCATAGTGAT 67 Query 296 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||| |||||||||||| | ||||| | |||| Sbjct 68 CAAACAGGATTAGAGACCCTGGTAGTCTATGCCCTGACCGAT 109 >seq144837 Length=127 Score = 75.2 bits (82), Expect = 3e-11 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 ||| |||||| || | |||| ||||| | |||| |||||||||||||| || |||||||| Sbjct 115 TAATACTGACACTGAGGCACAAAAGCATAGGGATCAAACAGGATTAGAGACACTGGTAGT 56 Query 322 CCACGCCCTAAACGAT 337 | | ||||| | |||| Sbjct 55 CTATGCCCTGACCGAT 40 >seq119713 Length=127 Score = 75.2 bits (82), Expect = 3e-11 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 ||| |||||| || | |||| ||||| | |||| |||||||||||||| ||||| ||||| Sbjct 10 TAATACTGACACTGAGGCACAAAAGCATAGGGATCAAACAGGATTAGAGACCCTTGTAGT 69 Query 322 CCACGCCCTAAACGAT 337 | | ||||| | |||| Sbjct 70 CTATGCCCTGACCGAT 85 >seq113493 Length=127 Score = 75.2 bits (82), Expect = 3e-11 Identities = 69/85 (81%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 31 CGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA 90 ||||||||||| |||||||||||| || | ||||| |||| ||| | | |||||| |||| Sbjct 3 CGTGCCAGCAGTCGCGGTAATACGGAGAGGGCAAGTGTTATTCGCATTGACTGGGTGTAA 62 Query 91 AGCGTGCGCAGGCGG-TTGTGTAAG 114 | ||||| ||| || |||| |||| Sbjct 63 ATGGTGCGTAGGTGGCTTGT-TAAG 86 >seq93072 Length=127 Score = 75.2 bits (82), Expect = 3e-11 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 ||| |||||| || | |||| ||||| | |||| |||||||||||||| ||| ||||||| Sbjct 116 TAATACTGACACTGAGGCACAAAAGCATAGGGATCAAACAGGATTAGAGACCATGGTAGT 57 Query 322 CCACGCCCTAAACGAT 337 | | ||||| | |||| Sbjct 56 CTATGCCCTGACCGAT 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1286740337792