Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000826485.1_202015-01- 07] 221,748 sequences; 115,049,889 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq163152 75.2 8e-12 seq138087 75.2 8e-12 >seq163152 Length=127 Score = 75.2 bits (82), Expect = 8e-12 Identities = 87/115 (76%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||| ||| || ||||||||||||| | | |||||||||| || Sbjct 10 TACCTTTTATCCGTTAAGCAATAGCCCTTCCATTCAGCACTATTGGATCACTATTGCCGA 69 Query 61 CTTTCGCATCTG-CTCTAGTTGTTGCTCT-CGCAATCAAGCACACTTTTGCCATT 113 |||||| |||| ||| | ||| ||| | || ||||||| ||||| ||||| Sbjct 70 CTTTCGTCTCTGACTCGATCTGTCAATCTACTCAGTCAAGCAATCTTTTACCATT 124 >seq138087 Length=127 Score = 75.2 bits (82), Expect = 8e-12 Identities = 87/115 (76%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||| ||| || ||||||||||||| | | ||||||||||| | Sbjct 7 TACCTTTTATCCGTTAAGCAATAGCCCTTCCATTCAGCACTATTGGATCACTATGGCAGA 66 Query 61 CTTTCGCATCTG-CTCTAGTTGTTGCTCT-CGCAATCAAGCACACTTTTGCCATT 113 |||||| |||| ||| | ||| ||| | || ||||||| ||||| ||||| Sbjct 67 CTTTCGTCTCTGACTCGATCTGTCAATCTACTCAGTCAAGCAATCTTTTACCATT 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351268231600