Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000826485.1_202015-01- 07] 221,748 sequences; 115,049,889 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq206018 75.2 2e-11 seq206017 75.2 2e-11 seq206016 75.2 2e-11 seq199407 75.2 2e-11 >seq206018 Length=972 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 115 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 56 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 55 TCACGTCCTTTCGCAGCGCCT 35 >seq206017 Length=877 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 191 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 250 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 251 TCACGTCCTTTCGCAGCGCCT 271 >seq206016 Length=847 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 191 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 250 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 251 TCACGTCCTTTCGCAGCGCCT 271 >seq199407 Length=942 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 828 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 887 Query 218 GTACGTTCTTTCTGAGAGCCT 238 |||| ||||| || |||| Sbjct 888 TCACGTCCTTTCGCAGCGCCT 908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 839792088556