Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20castellanii_20[genbank_20GCA_5F000826485.1_202015-01- 07] 221,748 sequences; 115,049,889 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq142647 89.7 2e-15 seq129103 89.7 2e-15 seq126794 89.7 2e-15 seq91567 89.7 2e-15 seq153887 86.0 2e-14 seq148731 86.0 2e-14 seq37138 86.0 2e-14 seq21842 84.2 7e-14 seq104297 77.0 1e-11 seq80580 77.0 1e-11 seq107024 75.2 4e-11 seq102110 75.2 4e-11 seq8874 75.2 4e-11 >seq142647 Length=127 Score = 89.7 bits (98), Expect = 2e-15 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 80 TAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGT 139 ||| ||| ||| ||| |||||||| |||||| | ||| |||||||| || | | Sbjct 2 TAATACGTACTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCT 61 Query 140 AGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTA 199 || ||||||||||||| ||| ||| | ||||| || |||| ||||| ||||||||||| Sbjct 62 AGTGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTA 121 Query 200 GTGC 203 | || Sbjct 122 GAGC 125 >seq129103 Length=127 Score = 89.7 bits (98), Expect = 2e-15 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 80 TAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGT 139 ||| ||| ||| ||| |||||||| |||||| | ||| |||||||| ||| | | Sbjct 11 TAATACGTACTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTTGTAGCT 70 Query 140 AGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAG 196 |||||||||||||||| ||| ||| | ||||| || |||| ||||| |||||||| Sbjct 71 AGGGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAG 127 >seq126794 Length=127 Score = 89.7 bits (98), Expect = 2e-15 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 80 TAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGT 139 ||| ||| ||| ||| |||||||| |||||| | ||| |||||||| || | | Sbjct 1 TAATACGTACTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCT 60 Query 140 AGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTA 199 ||| |||||||||||| ||| ||| | ||||| || |||| ||||| ||||||||||| Sbjct 61 AGGTGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTA 120 Query 200 GTGC 203 | || Sbjct 121 GAGC 124 >seq91567 Length=127 Score = 89.7 bits (98), Expect = 2e-15 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 80 TAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGT 139 ||| ||| ||| ||| |||||||| |||||| | ||| |||||||| || | | Sbjct 3 TAATACGTACTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCT 62 Query 140 AGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTA 199 | |||||||||||||| ||| ||| | ||||| || |||| ||||| ||||||||||| Sbjct 63 ATGGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTA 122 Query 200 GTGC 203 | || Sbjct 123 GAGC 126 >seq153887 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 89 CTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAA 148 ||| ||| |||||||| |||||| | ||| |||||||| || | |||||| ||| Sbjct 8 CTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGGGAA 67 Query 149 AGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||||||| ||| ||| | ||||| || |||| ||||| |||||||||||| || Sbjct 68 AGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTAGAGC 122 >seq148731 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 89 CTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAA 148 ||| ||| |||||||| |||||| | ||| |||||||| || | |||||||||| Sbjct 126 CTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGTGAA 67 Query 149 AGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || |||| ||| ||| | ||||| || |||| ||||| |||||||||||| || Sbjct 66 AGTCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTAGAGC 12 >seq37138 Length=127 Score = 86.0 bits (94), Expect = 2e-14 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 89 CTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAA 148 ||| ||| |||||||| |||||| | ||| |||||||| || | |||||| ||| Sbjct 8 CTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGCGAA 67 Query 149 AGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||||||| ||| ||| | ||||| || |||| ||||| |||||||||||| || Sbjct 68 AGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTAGAGC 122 >seq21842 Length=127 Score = 84.2 bits (92), Expect = 7e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 98 CGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAAC 157 |||||||| |||||| | ||| |||||||| || | ||||||||||||||||| Sbjct 5 CGAACCCATGTATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGTGAAAGGCTAATA 64 Query 158 AAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || ||| | ||||| || |||| ||||| |||||||||||| || Sbjct 65 AAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTAGAGC 110 >seq104297 Length=127 Score = 77.0 bits (84), Expect = 1e-11 Identities = 92/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||| |||| || | ||| ||| ||| ||| |||||||| |||||| | ||| Sbjct 125 GCCAGATTGAAAGTACTTTAATACGTACTGAAGGATCGAACCCATGTATGTTGCATAATA 66 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 |||||||| || | ||||||||||||||||| ||| ||| | ||||| || |||| Sbjct 65 CAGGGATGAGTGGTAGCTAGGGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCT 6 Query 182 CCGAA 186 |||| Sbjct 5 ACGAA 1 >seq80580 Length=127 Score = 77.0 bits (84), Expect = 1e-11 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 109 ATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAA 168 |||||| | ||| |||||||| || | ||||||||||||||||| ||| ||| | Sbjct 127 ATGTTGCATAATACCGGGATGAGTGGTAGCTAGGGGTGAAAGGCTAATCAAGCTTAGTGT 68 Query 169 TAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||| | || |||| ||||| |||||||||||| || Sbjct 67 TAGATAGTACTCTACGAAATCTATTTAGGTAGAGC 33 >seq107024 Length=127 Score = 75.2 bits (82), Expect = 4e-11 Identities = 91/124 (73%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 69 TGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGAT 128 |||| || | ||| ||| ||| ||| |||||||| |||||| | ||| ||||| Sbjct 4 TGAAAGTACTTTAATACGTACTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGAT 63 Query 129 GAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAA 188 || || | ||||||||||||||||| ||| ||| | ||||| || |||| ||||| Sbjct 64 TAGTGGTAGCTAGGGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAAT 123 Query 189 CTAT 192 |||| Sbjct 124 CTAT 127 >seq102110 Length=127 Score = 75.2 bits (82), Expect = 4e-11 Identities = 92/126 (73%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||| |||| || | ||| ||| ||| ||| |||||||| |||||| | ||| Sbjct 1 GCCAGATTGAAAGTACTTTAATACGTACTGAAGGATCGAACCCATGTATGTTGCATAATA 60 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 | |||||| || | ||||||||||||||||| ||| ||| | ||||| || |||| Sbjct 61 CCGTGATGAGTGGTAGCTAGGGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCT 120 Query 182 CCGAAA 187 ||||| Sbjct 121 ACGAAA 126 >seq8874 Length=127 Score = 75.2 bits (82), Expect = 4e-11 Identities = 92/126 (73%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||| |||| || | ||| ||| ||| ||| |||||||| |||||| | ||| Sbjct 126 GCCAGATTGAAAGTACTTTAATACGTACTGAAGGATCGAACCCATGTATGTTGCATAATA 67 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 ||||||| || | ||||||||||||||||| ||| ||| | ||||| || |||| Sbjct 66 CCTGGATGAGTGGTAGCTAGGGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCT 7 Query 182 CCGAAA 187 ||||| Sbjct 6 ACGAAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1685853345792