Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq56145 82.4 2e-13 seq50298 82.4 2e-13 seq50129 82.4 2e-13 seq48978 82.4 2e-13 seq48961 82.4 2e-13 seq48955 82.4 2e-13 seq48827 82.4 2e-13 seq48636 82.4 2e-13 seq48059 82.4 2e-13 seq45823 82.4 2e-13 seq44233 82.4 2e-13 seq44210 82.4 2e-13 seq43012 82.4 2e-13 seq40574 82.4 2e-13 seq31590 82.4 2e-13 seq31115 82.4 2e-13 seq27094 82.4 2e-13 seq25285 82.4 2e-13 seq1027 82.4 2e-13 seq48214 78.8 2e-12 seq47466 78.8 2e-12 seq53214 77.0 8e-12 seq48868 77.0 8e-12 >seq56145 Length=671 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 254 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 313 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 314 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 358 >seq50298 Length=430 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 259 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 200 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 199 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 155 >seq50129 Length=425 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 147 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 88 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 87 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 43 >seq48978 Length=555 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 146 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 87 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 86 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 42 >seq48961 Length=710 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 488 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 429 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 428 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 384 >seq48955 Length=760 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 449 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 390 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 389 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 345 >seq48827 Length=765 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 548 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 489 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 488 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 444 >seq48636 Length=564 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 270 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 211 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 210 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 166 >seq48059 Length=473 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 125 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 66 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 65 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 21 >seq45823 Length=569 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 136 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 77 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 76 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 32 >seq44233 Length=849 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 343 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 402 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 403 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 447 >seq44210 Length=1663 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 394 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 335 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 334 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 290 >seq43012 Length=542 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 188 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 247 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 248 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 292 >seq40574 Length=468 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 273 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 332 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 333 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 377 >seq31590 Length=816 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 240 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 181 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 180 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 136 >seq31115 Length=1083 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 539 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 598 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 599 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 643 >seq27094 Length=697 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 188 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 129 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 128 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 84 >seq25285 Length=1008 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 364 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 305 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 304 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 260 >seq1027 Length=5164 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 4642 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 4583 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 4582 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 4538 >seq48214 Length=449 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 96 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 37 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 || |||| ||| | | |||||| |||||| || Sbjct 36 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGT 4 >seq47466 Length=869 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 94 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 35 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 || |||| ||| | | |||||| |||||| || Sbjct 34 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGT 2 >seq53214 Length=859 Score = 77.0 bits (84), Expect = 8e-12 Identities = 80/105 (76%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | |||| | | |||||| ||||||||||| |||||||||||| | | || Sbjct 278 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGGGAGGGC 337 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 338 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 382 >seq48868 Length=838 Score = 77.0 bits (84), Expect = 8e-12 Identities = 80/105 (76%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| |||| | ||| | | |||||| ||||||||||| |||||||||||| || | || Sbjct 319 TACTTGAAAGAGGAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 260 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || |||| ||| | | |||||| |||||| || | ||| |||| Sbjct 259 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTT 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288857267776