Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq26448 82.4 7e-14 seq1026 82.4 7e-14 >seq26448 Length=1245 Score = 82.4 bits (90), Expect = 7e-14 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 516 GCGACTGTTTATTAAAAACACAGGACTCTGCGAAATTGTAAAATGAAGTATAGGGTCTGA 575 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 576 CACCTGCCCGGTGCTGAAAG 595 >seq1026 Length=8135 Score = 82.4 bits (90), Expect = 7e-14 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 1187 GCGACTGTTTATTAAAAACACAGGACTCTGCGAAATTGTAAAATGAAGTATAGGGTCTGA 1128 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 1127 CACCTGCCCGGTGCTGAAAG 1108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476533973314