Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq56145 111 3e-22 seq54361 111 3e-22 seq50129 111 3e-22 seq48978 111 3e-22 seq48905 111 3e-22 seq48868 111 3e-22 seq48636 111 3e-22 seq48214 111 3e-22 seq47466 111 3e-22 seq45823 111 3e-22 seq44211 111 3e-22 seq44210 111 3e-22 seq40574 111 3e-22 seq33556 111 3e-22 seq31590 111 3e-22 seq31115 111 3e-22 seq27094 111 3e-22 seq25285 111 3e-22 seq1027 111 3e-22 seq53214 109 1e-21 seq44233 109 1e-21 seq48961 107 4e-21 seq48059 104 5e-20 seq48955 102 2e-19 seq48827 100 6e-19 seq43012 96.9 7e-18 seq50298 93.3 9e-17 seq48221 73.4 8e-11 >seq56145 Length=671 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Minus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 207 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 149 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 148 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 91 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 90 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 31 Query 195 C 195 | Sbjct 30 C 30 >seq54361 Length=404 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 41 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 99 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 100 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 157 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 158 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 217 Query 195 C 195 | Sbjct 218 C 218 >seq50129 Length=425 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 194 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 252 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 253 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 310 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 311 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 370 Query 195 C 195 | Sbjct 371 C 371 >seq48978 Length=555 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 193 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 251 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 252 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 309 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 310 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 369 Query 195 C 195 | Sbjct 370 C 370 >seq48905 Length=543 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 12 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 70 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 71 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 128 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 129 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 188 Query 195 C 195 | Sbjct 189 C 189 >seq48868 Length=838 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 366 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 424 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 425 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 482 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 483 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 542 Query 195 C 195 | Sbjct 543 C 543 >seq48636 Length=564 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 317 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 375 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 376 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 433 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 434 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 493 Query 195 C 195 | Sbjct 494 C 494 >seq48214 Length=449 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 143 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 201 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 202 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 259 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 260 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 319 Query 195 C 195 | Sbjct 320 C 320 >seq47466 Length=869 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 141 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 199 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 200 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 257 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 258 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 317 Query 195 C 195 | Sbjct 318 C 318 >seq45823 Length=569 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 183 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 241 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 242 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 299 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 300 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 359 Query 195 C 195 | Sbjct 360 C 360 >seq44211 Length=1315 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 28 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 86 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 87 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 144 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 145 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 204 Query 195 C 195 | Sbjct 205 C 205 >seq44210 Length=1663 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 441 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 499 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 500 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 557 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 558 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 617 Query 195 C 195 | Sbjct 618 C 618 >seq40574 Length=468 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Minus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 225 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 167 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 166 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 109 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 108 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 49 Query 195 C 195 | Sbjct 48 C 48 >seq33556 Length=590 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 69 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 127 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 128 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 185 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 186 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 245 Query 195 C 195 | Sbjct 246 C 246 >seq31590 Length=816 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 287 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 345 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 346 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 403 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 404 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 463 Query 195 C 195 | Sbjct 464 C 464 >seq31115 Length=1083 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Minus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 492 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 434 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 433 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 376 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 375 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 316 Query 195 C 195 | Sbjct 315 C 315 >seq27094 Length=697 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 235 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 293 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 294 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 351 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 352 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 411 Query 195 C 195 | Sbjct 412 C 412 >seq25285 Length=1008 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 411 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 469 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 470 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 527 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 528 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 587 Query 195 C 195 | Sbjct 588 C 588 >seq1027 Length=5164 Score = 111 bits (122), Expect = 3e-22 Identities = 137/181 (76%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 4689 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 4747 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 4748 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 4805 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 4806 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 4865 Query 195 C 195 | Sbjct 4866 C 4866 >seq53214 Length=859 Score = 109 bits (120), Expect = 1e-21 Identities = 136/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 231 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 173 Query 76 CCACTGCTGCCTCCCGTAGGAGTC-TGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 172 CCACTGCTGCCCTTTAAAAAAGACTTGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 114 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 113 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 54 Query 195 C 195 | Sbjct 53 C 53 >seq44233 Length=849 Score = 109 bits (120), Expect = 1e-21 Identities = 136/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 296 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 238 Query 76 CCACTGCTGCCTCCCGTAGGAGTC-TGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 237 CCACTGCTGCCCTTTAAAAAAGACTTGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 179 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| |||||| Sbjct 178 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 119 Query 195 C 195 | Sbjct 118 C 118 >seq48961 Length=710 Score = 107 bits (118), Expect = 4e-21 Identities = 135/179 (75%), Gaps = 5/179 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 535 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 593 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 594 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 651 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| ||||| Sbjct 652 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTAAT 710 >seq48059 Length=473 Score = 104 bits (114), Expect = 5e-20 Identities = 133/177 (75%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 172 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 230 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 231 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 288 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTA 191 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| ||| Sbjct 289 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACTACCTA 345 >seq48955 Length=760 Score = 102 bits (112), Expect = 2e-19 Identities = 136/181 (75%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 496 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 554 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 555 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 612 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| | ||| || | || | | |||| | | ||||| | |||||| |||||| Sbjct 613 CTCTCAAATCAGCTA-AGCTCATAGGCTTGTTAATTAATTACTATAACAACTACCTAATC 671 Query 195 C 195 | Sbjct 672 C 672 >seq48827 Length=765 Score = 100 bits (110), Expect = 6e-19 Identities = 129/173 (75%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 595 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 653 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || |||||||| | ||||||||| |||| |||||||| Sbjct 654 CCACTGCTGCCCTTTAAAAAGACCTTGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 712 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTA 187 |||||| | ||| || | ||| | | |||| | | ||||| | |||||| Sbjct 713 CTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTMTAACAACTA 765 >seq43012 Length=542 Score = 96.9 bits (106), Expect = 7e-18 Identities = 109/141 (77%), Gaps = 4/141 (3%) Strand=Plus/Minus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 141 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 83 Query 76 CCACTGCTGCCTCCCGTAGGAGTC-TGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 82 CCACTGCTGCCCTTTAAAAAAGACTTGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 24 Query 135 CTCTCAGACCAGTTACGGATC 155 |||||| | ||| || | ||| Sbjct 23 CTCTCAAATCAGCTAAGCATC 3 >seq50298 Length=430 Score = 93.3 bits (102), Expect = 9e-17 Identities = 100/126 (79%), Gaps = 5/126 (4%) Strand=Plus/Plus Query 17 CCTTCTT-TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 75 ||||||| |||| |||| |||| || ||||| |||||||| ||||||| ||||||| Sbjct 306 CCTTCTTATCACTCACGTAACATTA-CTCGATCAAGCTTTCGCTCATTGTCAAATATTCT 364 Query 76 CCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 ||||||||| ||| | || | |||||||| | ||||||||| |||| |||||||| Sbjct 365 CCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGCTGATCATT 422 Query 135 CTCTCA 140 |||||| Sbjct 423 CTCTCA 428 >seq48221 Length=366 Score = 73.4 bits (80), Expect = 8e-11 Identities = 96/129 (74%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 68 AATATTCCCCACTGCTG-CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGAC 126 ||||||| ||||||||| ||| | || | |||||||| | ||||||||| |||| | Sbjct 3 AATATTCTCCACTGCTGCCCTTTAAAAAGACT-TGGACCGT-TTTCAGTTCCAATGTGGC 60 Query 127 TGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACT 186 ||||||| |||||| | ||| || | ||| | | |||| | | ||||| | ||||| Sbjct 61 TGATCATTCTCTCAAATCAGCTAAGCATCATAGGCTTGTTAATTAATTACTATAACAACT 120 Query 187 AGCTAATCC 195 | ||||||| Sbjct 121 ACCTAATCC 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071382592320