Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq45361 80.6 2e-13 seq30935 80.6 2e-13 seq18978 80.6 2e-13 seq17368 80.6 2e-13 seq42042 77.0 2e-12 >seq45361 Length=527 Score = 80.6 bits (88), Expect = 2e-13 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 225 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 282 Query 122 GCT 124 ||| Sbjct 283 GCT 285 >seq30935 Length=632 Score = 80.6 bits (88), Expect = 2e-13 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 107 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 164 Query 122 GCT 124 ||| Sbjct 165 GCT 167 >seq18978 Length=4319 Score = 80.6 bits (88), Expect = 2e-13 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 3522 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 3579 Query 122 GCT 124 ||| Sbjct 3580 GCT 3582 >seq17368 Length=2821 Score = 80.6 bits (88), Expect = 2e-13 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 533 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 476 Query 122 GCT 124 ||| Sbjct 475 GCT 473 >seq42042 Length=516 Score = 77.0 bits (84), Expect = 2e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 458 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 515 Query 122 G 122 | Sbjct 516 G 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300637584920