Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq40748 82.4 9e-14 seq36839 82.4 9e-14 seq39498 78.8 1e-12 >seq40748 Length=923 Score = 82.4 bits (90), Expect = 9e-14 Identities = 78/99 (79%), Gaps = 13/99 (13%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG--GC-GTAA----------GCCTGCT 79 ||||||||| ||||| |||||||||||||||||| || |||| ||||||| Sbjct 441 GTCCTATTCCATTATCCCATGCTAATGTATTCGGTGGCAGTAAAAGAATATCTGCCTGCT 382 Query 80 TTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 ||||||||||||||||| ||| |||||| | |||| || Sbjct 381 TTGAACACTCTAATTTTTTCACGGTAAACGATCTGGGTC 343 >seq36839 Length=875 Score = 82.4 bits (90), Expect = 9e-14 Identities = 78/99 (79%), Gaps = 13/99 (13%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG--GC-GTAA----------GCCTGCT 79 ||||||||| ||||| |||||||||||||||||| || |||| ||||||| Sbjct 479 GTCCTATTCCATTATCCCATGCTAATGTATTCGGTGGCAGTAAAAGAATATCTGCCTGCT 538 Query 80 TTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 ||||||||||||||||| ||| |||||| | |||| || Sbjct 539 TTGAACACTCTAATTTTTTCACGGTAAACGATCTGGGTC 577 >seq39498 Length=967 Score = 78.8 bits (86), Expect = 1e-12 Identities = 78/101 (77%), Gaps = 15/101 (15%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG--GC-GTAA------------GCCTG 77 ||||||||| ||||| |||||||||||||||||| || |||| ||||| Sbjct 465 GTCCTATTCCATTATCCCATGCTAATGTATTCGGTGGCAGTAAAAAGAAATATCTGCCTG 524 Query 78 CTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 ||||||||||||||||||| ||| |||||| | |||| || Sbjct 525 CTTTGAACACTCTAATTTTTTCACGGTAAACGATCTGGGTC 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594867912996