Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq56145 84.2 4e-14 seq50298 84.2 4e-14 seq50129 84.2 4e-14 seq48978 84.2 4e-14 seq48961 84.2 4e-14 seq48955 84.2 4e-14 seq48827 84.2 4e-14 seq48636 84.2 4e-14 seq48059 84.2 4e-14 seq45823 84.2 4e-14 seq44233 84.2 4e-14 seq44210 84.2 4e-14 seq43012 84.2 4e-14 seq40574 84.2 4e-14 seq31590 84.2 4e-14 seq31115 84.2 4e-14 seq27094 84.2 4e-14 seq25285 84.2 4e-14 seq1027 84.2 4e-14 seq48868 82.4 1e-13 seq48214 82.4 1e-13 seq47466 82.4 1e-13 seq53214 78.8 2e-12 >seq56145 Length=671 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 356 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 297 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 296 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 266 >seq50298 Length=430 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 157 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 216 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 217 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 247 >seq50129 Length=425 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 45 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 104 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 105 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 135 >seq48978 Length=555 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 44 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 103 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 104 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 134 >seq48961 Length=710 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 386 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 445 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 446 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 476 >seq48955 Length=760 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 347 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 406 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 407 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 437 >seq48827 Length=765 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 446 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 505 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 506 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 536 >seq48636 Length=564 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 168 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 227 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 228 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 258 >seq48059 Length=473 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 23 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 82 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 83 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 113 >seq45823 Length=569 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 34 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 93 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 94 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 124 >seq44233 Length=849 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 445 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 386 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 385 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 355 >seq44210 Length=1663 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 292 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 351 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 352 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 382 >seq43012 Length=542 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 290 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 231 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 230 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 200 >seq40574 Length=468 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 375 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 316 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 315 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 285 >seq31590 Length=816 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 138 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 197 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 198 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 228 >seq31115 Length=1083 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 641 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 582 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 581 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 551 >seq27094 Length=697 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 86 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 145 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 146 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 176 >seq25285 Length=1008 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 262 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 321 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 322 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 352 >seq1027 Length=5164 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 4540 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 4599 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 4600 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 4630 >seq48868 Length=838 Score = 82.4 bits (90), Expect = 1e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 217 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 276 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCT 277 ||| ||||||||||| |||||| | |||| Sbjct 277 GCGACTGCTGGCACGAAGTTAGTCAGGGCT 306 >seq48214 Length=449 Score = 82.4 bits (90), Expect = 1e-13 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258 ||||||||||||| | ||| || ||||| || ||| || |||||||||||| ||||||| Sbjct 5 CCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCTGG 64 Query 259 CACGTAGTTAGCCGTGGCTT 278 |||| |||||| | ||||| Sbjct 65 CACGAAGTTAGTCAGGGCTT 84 >seq47466 Length=869 Score = 82.4 bits (90), Expect = 1e-13 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258 ||||||||||||| | ||| || ||||| || ||| || |||||||||||| ||||||| Sbjct 3 CCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCTGG 62 Query 259 CACGTAGTTAGCCGTGGCTT 278 |||| |||||| | ||||| Sbjct 63 CACGAAGTTAGTCAGGGCTT 82 >seq53214 Length=859 Score = 78.8 bits (86), Expect = 2e-12 Identities = 72/91 (79%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| ||||||||||||| | ||| || ||||| || ||| | ||||||||| Sbjct 380 CCACCTACTTACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCCCCGTATTACC 321 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 320 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828337577774