Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq45941 82.4 8e-14 seq43788 82.4 8e-14 seq40748 82.4 8e-14 seq39498 82.4 8e-14 seq36839 82.4 8e-14 >seq45941 Length=503 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 141 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 200 Query 183 GGATTTAT 190 |||||||| Sbjct 201 GGATTTAT 208 >seq43788 Length=831 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 442 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 501 Query 183 GGATTTAT 190 |||||||| Sbjct 502 GGATTTAT 509 >seq40748 Length=923 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 531 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 590 Query 183 GGATTTAT 190 |||||||| Sbjct 591 GGATTTAT 598 >seq39498 Length=967 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 375 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 316 Query 183 GGATTTAT 190 |||||||| Sbjct 315 GGATTTAT 308 >seq36839 Length=875 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 390 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 331 Query 183 GGATTTAT 190 |||||||| Sbjct 330 GGATTTAT 323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511714333760