Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq16332 89.7 1e-15 seq2500 89.7 1e-15 >seq16332 Length=3205 Score = 89.7 bits (98), Expect = 1e-15 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 170 AGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCC 229 ||||| || |||||||| | ||| || | ||| ||||||||||| || || ||||| || Sbjct 1733 AGGCCATCTTCGCCCCATCTGTACGCTCTGCTTCGTGCATGGTCGTGAGGAAAGTAACCC 1792 Query 230 CAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGG 289 |||||||| |||| | | || ||||| | || ||||||||||| || || ||| Sbjct 1793 CAGGCGTCTCCATTTGGGGAATAATCTTCTCTGACGGTGCCCCATTGTCGATCAGACAGA 1852 Query 290 TAGGGGCCCCAC 301 || || |||||| Sbjct 1853 TAAGGCCCCCAC 1864 >seq2500 Length=3007 Score = 89.7 bits (98), Expect = 1e-15 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 170 AGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCC 229 ||||| || |||||||| | ||| || | ||| ||||| ||||| || || |||||| || Sbjct 1937 AGGCCATCTTCGCCCCATCTGTACGCTCTGCTTCGTGCGTGGTCGTGAGGAAAGTAGCCC 1878 Query 230 CAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGG 289 |||||||| |||| | | || ||||| | || ||||||||||| || || ||| Sbjct 1877 CAGGCGTCTCCATTTGGGGAATAATCTTCTCTGACGGTGCCCCATTGTCGATCAGACAGA 1818 Query 290 TAGGGGCCCCAC 301 || || |||||| Sbjct 1817 TAAGGCCCCCAC 1806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007419452480