Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20comandoni_20[genbank_20GCA_5F002025285.1_202017-03- 13] 57,594 sequences; 86,214,659 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq56145 118 3e-24 seq50298 118 3e-24 seq50129 118 3e-24 seq48978 118 3e-24 seq48961 118 3e-24 seq48955 118 3e-24 seq48868 118 3e-24 seq48827 118 3e-24 seq48636 118 3e-24 seq48059 118 3e-24 seq45823 118 3e-24 seq44233 118 3e-24 seq44210 118 3e-24 seq43012 118 3e-24 seq40574 118 3e-24 seq31590 118 3e-24 seq31115 118 3e-24 seq27094 118 3e-24 seq25285 118 3e-24 seq1027 118 3e-24 seq53214 114 3e-23 seq48214 96.9 8e-18 seq47466 96.9 8e-18 >seq56145 Length=671 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 254 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 313 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 314 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 366 >seq50298 Length=430 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 259 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 200 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 199 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 147 >seq50129 Length=425 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 147 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 88 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 87 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 35 >seq48978 Length=555 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 146 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 87 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 86 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 34 >seq48961 Length=710 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 488 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 429 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 428 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 376 >seq48955 Length=760 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 449 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 390 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 389 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 337 >seq48868 Length=838 Score = 118 bits (130), Expect = 3e-24 Identities = 96/114 (84%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 TACTTGAG-GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGG 59 ||||||| ||||| |||| | |||||| ||||||||||| |||||||||||| || ||| Sbjct 319 TACTTGAAAGAGGA-GCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGG 261 Query 60 CTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 |||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 260 CTAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 207 >seq48827 Length=765 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 548 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 489 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 488 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 436 >seq48636 Length=564 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 270 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 211 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 210 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 158 >seq48059 Length=473 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 125 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 66 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 65 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 13 >seq45823 Length=569 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 136 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 77 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 76 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 24 >seq44233 Length=849 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 343 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 402 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 403 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 455 >seq44210 Length=1663 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 394 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 335 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 334 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 282 >seq43012 Length=542 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 188 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 247 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 248 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 300 >seq40574 Length=468 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 273 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 332 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 333 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 385 >seq31590 Length=816 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 240 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 181 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 180 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 128 >seq31115 Length=1083 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 539 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 598 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 599 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 651 >seq27094 Length=697 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 188 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 129 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 128 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 76 >seq25285 Length=1008 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 364 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 305 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 304 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 252 >seq1027 Length=5164 Score = 118 bits (130), Expect = 3e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 4642 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 4583 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 4582 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 4530 >seq53214 Length=859 Score = 114 bits (126), Expect = 3e-23 Identities = 93/113 (82%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| | |||| Sbjct 278 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGGGAGGGC 337 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 113 ||| ||||| || | | |||||| ||||||||| ||||||||||| |||||| Sbjct 338 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGTAAGTAGGTGGTTTATTAAGT 390 >seq48214 Length=449 Score = 96.9 bits (106), Expect = 8e-18 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 96 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 37 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGT 93 ||| ||||| || | | |||||| ||||||||| Sbjct 36 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGT 4 >seq47466 Length=869 Score = 96.9 bits (106), Expect = 8e-18 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||||| ||||||| | |||||| ||||||||||| |||||||||||| || |||| Sbjct 94 TACTTGAAAGAGAAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGC 35 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGT 93 ||| ||||| || | | |||||| ||||||||| Sbjct 34 TAGTGTTATTCGTATTGACTGGGTGTAAAGGGT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202507028992