Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq70274 235 1e-59 seq68216 235 1e-59 >seq70274 Length=4552 Score = 235 bits (260), Expect = 1e-59 Identities = 217/271 (80%), Gaps = 19/271 (7%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-----------TTTGC 114 |||| | ||||| |||||||||||||||||||||||||||| | ||| Sbjct 4545 CCAGATCGTTTACCGTGAAAAAATTAGAGTGTTCAAAGCAGGCAGATTTAACCATTCTGC 4486 Query 115 T--CGAATACATTAGCATGGAATAATAGAATAGGACG-TGCGGTTCTATTT---TGTTGG 168 ||||||||||||||||| ||||| |||||||| || | |||||| |||||| Sbjct 4485 CACCGAATACATTAGCATGGGATAATGAAATAGGACCCTGTCCTCCTATTTACGTGTTGG 4426 Query 169 TTTCT-AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTC 227 ||| | |||||| ||||||||||||||||||||| ||||| | | |||| ||||||| Sbjct 4425 TTTTTGAGGACCAGGGTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTC 4366 Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 ||||||||||||||||||||||| |||| ||||| |||||||||| | ||||||||| Sbjct 4365 AGAGGTGAAATTCTTGGATTTATGAAAGATTAACTTCTGCGAAAGCATCTGCCAAGGATG 4306 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||| |||||||||||||||| Sbjct 4305 TTTTCATTAATCA-AGAACGAAAGTTAGGGG 4276 >seq68216 Length=4736 Score = 235 bits (260), Expect = 1e-59 Identities = 217/271 (80%), Gaps = 19/271 (7%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-----------TTTGC 114 |||| | ||||| |||||||||||||||||||||||||||| | ||| Sbjct 8 CCAGATCGTTTACCGTGAAAAAATTAGAGTGTTCAAAGCAGGCAGATTTAACCATTCTGC 67 Query 115 T--CGAATACATTAGCATGGAATAATAGAATAGGACG-TGCGGTTCTATTT---TGTTGG 168 ||||||||||||||||| ||||| |||||||| || | |||||| |||||| Sbjct 68 CACCGAATACATTAGCATGGGATAATGAAATAGGACCCTGTCCTCCTATTTACGTGTTGG 127 Query 169 TTTCT-AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTC 227 ||| | |||||| ||||||||||||||||||||| ||||| | | |||| ||||||| Sbjct 128 TTTTTGAGGACCAGGGTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTC 187 Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 ||||||||||||||||||||||| |||| ||||| |||||||||| | ||||||||| Sbjct 188 AGAGGTGAAATTCTTGGATTTATGAAAGATTAACTTCTGCGAAAGCATCTGCCAAGGATG 247 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||| |||||||||||||||| Sbjct 248 TTTTCATTAATCA-AGAACGAAAGTTAGGGG 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914537294528