Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq10719 82.4 7e-14 seq33749 77.0 3e-12 seq1005 77.0 3e-12 seq14527 75.2 1e-11 seq65258 73.4 4e-11 seq57440 73.4 4e-11 seq55054 73.4 4e-11 seq47295 73.4 4e-11 seq47294 73.4 4e-11 seq44688 73.4 4e-11 seq43392 73.4 4e-11 seq42202 73.4 4e-11 seq35907 73.4 4e-11 seq29002 73.4 4e-11 seq26828 73.4 4e-11 seq26304 73.4 4e-11 seq22635 73.4 4e-11 seq13442 73.4 4e-11 seq6508 73.4 4e-11 seq6043 73.4 4e-11 seq190 73.4 4e-11 >seq10719 Length=127 Score = 82.4 bits (90), Expect = 7e-14 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 3 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGTCTGA 62 Query 128 CGCCTGCCCGGTGCCGGAAG 147 |||||||||||||| | ||| Sbjct 63 CGCCTGCCCGGTGCTGAAAG 82 >seq33749 Length=127 Score = 77.0 bits (84), Expect = 3e-12 Identities = 65/80 (81%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 26 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACGATGTATAGGGTCTGA 85 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 86 CACCTGCCCGGTGCTGAAAG 105 >seq1005 Length=127 Score = 77.0 bits (84), Expect = 3e-12 Identities = 65/80 (81%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 106 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAGCGATGTATAGGGTCTGA 47 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 46 CACCTGCCCGGTGCTGAAAG 27 >seq14527 Length=127 Score = 75.2 bits (82), Expect = 1e-11 Identities = 67/82 (82%), Gaps = 4/82 (5%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAA--CACGAAAGTGGACGTATAGGGTGT 125 ||||||||||| ||||||||||| ||||||| || || ||| || ||||||||| | Sbjct 27 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTACAAAA--CGATGTATAGGGTCT 84 Query 126 GACGCCTGCCCGGTGCCGGAAG 147 ||| |||||||||||| | ||| Sbjct 85 GACACCTGCCCGGTGCTGAAAG 106 >seq65258 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||| | || | || || ||||||||| ||| Sbjct 93 GCGACTGTTTACTAAAAACACAGGACTCTACTAAGTTGCAAAACGATGTATAGGGTCTGA 34 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 33 CACCTGCCCGGTGCTGAAAG 14 >seq57440 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||| ||| ||||||| || | || || ||||||||| ||| Sbjct 45 GCGACTGTTTACTAAAAACGCAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGTCTGA 104 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 105 CACCTGCCCGGTGCTGAAAG 124 >seq55054 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||| || | || || ||||||||| ||| Sbjct 40 GCGACTGTTTACTAAAAACACAGGCCTCTGCTAAGTTGCAAAACGATGTATAGGGTCTGA 99 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 100 CACCTGCCCGGTGCTGAAAG 119 >seq47295 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||| || || | || || ||||||||| ||| Sbjct 92 GCGACTGTTTACTAAAAACACAGGACTCAGCTAAGTTGCAAAACGATGTATAGGGTCTGA 33 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 32 CACCTGCCCGGTGCTGAAAG 13 >seq47294 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||| || || | || || ||||||||| ||| Sbjct 92 GCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGCAAAACGATGTATAGGGTCTGA 33 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 32 CACCTGCCCGGTGCTGAAAG 13 >seq44688 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || | ||||||||| ||| Sbjct 108 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACAATGTATAGGGTCTGA 49 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 48 CACCTGCCCGGTGCTGAAAG 29 >seq43392 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || |||||||| ||| Sbjct 9 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGGCTGA 68 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 69 CACCTGCCCGGTGCTGAAAG 88 >seq42202 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| | | || || ||||||||| ||| Sbjct 31 GCGACTGTTTACTAAAAACACAGGACTCTGCTAGGTTGCAAAACGATGTATAGGGTCTGA 90 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 91 CACCTGCCCGGTGCTGAAAG 110 >seq35907 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || |||||||| ||| Sbjct 119 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGCCTGA 60 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 59 CACCTGCCCGGTGCTGAAAG 40 >seq29002 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||| |||| ||||||| || | || || ||||||||| ||| Sbjct 46 GCGACTGTTTACTAAAAATACAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGTCTGA 105 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 106 CACCTGCCCGGTGCTGAAAG 125 >seq26828 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||| ||| || | || || ||||||||| ||| Sbjct 91 GCGACTGTTTACTAAAAACACAGGACTATGCTAAGTTGCAAAACGATGTATAGGGTCTGA 32 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 31 CACCTGCCCGGTGCTGAAAG 12 >seq26304 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 124 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGTCTGA 65 Query 128 CGCCTGCCCGGTGCCGGAAG 147 |||||||||||| | ||| Sbjct 64 TACCTGCCCGGTGCTGAAAG 45 >seq22635 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || |||||||| ||| Sbjct 17 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACGATATATAGGGTCTGA 76 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 77 CACCTGCCCGGTGCTGAAAG 96 >seq13442 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||| || ||||||| || | || || ||||||||| ||| Sbjct 44 GCGACTGTTTACTAAAAACATAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGTCTGA 103 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 104 CACCTGCCCGGTGCTGAAAG 123 >seq6508 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || |||||| || ||| Sbjct 117 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACGATGTATAGAGTCTGA 58 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 57 CACCTGCCCGGTGCTGAAAG 38 >seq6043 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 2 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGTCTGA 61 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | ||||||||||| | ||| Sbjct 62 CATCTGCCCGGTGCTGAAAG 81 >seq190 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| | | Sbjct 122 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGCAAAACGATGTATAGGGTCTAA 63 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 62 CACCTGCCCGGTGCTGAAAG 43 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476465533591