Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq70274 75.2 1e-11 seq68216 75.2 1e-11 >seq70274 Length=4552 Score = 75.2 bits (82), Expect = 1e-11 Identities = 91/123 (74%), Gaps = 17/123 (14%) Strand=Plus/Plus Query 10 AAACCAACA---AAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||| ||||||| || | ||||||| ||||| ||||||||||||||||| Sbjct 4423 AAACCAACACGTAAATAGGAGGACAGGGTCCTATTTCATTATCCCATGCTAATGTATTCG 4482 Query 66 GGCG---------TAA----GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 | | ||| |||||||||||||||||||||||| ||| |||||| | | Sbjct 4483 GTGGCAGAATGGTTAAATCTGCCTGCTTTGAACACTCTAATTTTTTCACGGTAAACGATC 4542 Query 113 TGG 115 ||| Sbjct 4543 TGG 4545 >seq68216 Length=4736 Score = 75.2 bits (82), Expect = 1e-11 Identities = 91/123 (74%), Gaps = 17/123 (14%) Strand=Plus/Minus Query 10 AAACCAACA---AAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||| ||||||| || | ||||||| ||||| ||||||||||||||||| Sbjct 130 AAACCAACACGTAAATAGGAGGACAGGGTCCTATTTCATTATCCCATGCTAATGTATTCG 71 Query 66 GGCG---------TAA----GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 | | ||| |||||||||||||||||||||||| ||| |||||| | | Sbjct 70 GTGGCAGAATGGTTAAATCTGCCTGCTTTGAACACTCTAATTTTTTCACGGTAAACGATC 11 Query 113 TGG 115 ||| Sbjct 10 TGG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594782478174