Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20culbertsoni_20[genbank_20GCA_5F000826265.1_202015-01- 06] 72,411 sequences; 55,543,795 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq71361 86.0 9e-12 >seq71361 Length=36657 Score = 86.0 bits (94), Expect = 9e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 162724 CTTGGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATG 162783 |||||||| ||| | ||| ||||||||||| ||||||| ||||| || ||||||||| Sbjct 32718 CTTGGAAATCTCGACGCCAAGCGTGACTGGGGCCACGCCAGGGACTATGTGGAGGCTATG 32659 Query 162784 TGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGT-GATCGCAACTGGTGAGCAGTA 162842 ||| ||||| | || | || ||||| || || | ||| | | || || ||||||||| | Sbjct 32658 TGGATGATGTTGCAACTGGAAAAGCCCGAAGACTTTGTAGTTTGC-ACCGGTGAGCAGCA 32600 Query 162843 TTCTGT 162848 || || Sbjct 32599 CTCAGT 32594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690833334348360