Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20divionensis_20[genbank_20GCA_5F000826405.1_202015-01- 07] 107,714 sequences; 84,769,362 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq21089 77.0 4e-12 seq17276 77.0 4e-12 seq2035 77.0 4e-12 >seq21089 Length=127 Score = 77.0 bits (84), Expect = 4e-12 Identities = 75/96 (78%), Gaps = 13/96 (14%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCG--GGC-GTAA----------GCCTGCT 79 ||||||||| ||||| ||||||||||||||||| ||| |||| || |||| Sbjct 119 GTCCTATTCCATTATCCCATGCTAATGTATTCGGTGGCAGTAATAAAATATCTGCATGCT 60 Query 80 TTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 ||||||||||||||||| ||| |||||| | |||| Sbjct 59 TTGAACACTCTAATTTTTTCACGGTAAACGATCTGG 24 >seq17276 Length=127 Score = 77.0 bits (84), Expect = 4e-12 Identities = 75/96 (78%), Gaps = 13/96 (14%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCG--GGC-GTAA----------GCCTGCT 79 ||||||||| ||||| ||||||||||||||||| ||| |||| ||||||| Sbjct 2 GTCCTATTCCATTATCCCATGCTAATGTATTCGGTGGCAGTAATAAAATATCTGCCTGCT 61 Query 80 TTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 || |||||||||||||| ||| |||||| | |||| Sbjct 62 TTTAACACTCTAATTTTTTCACGGTAAACGATCTGG 97 >seq2035 Length=127 Score = 77.0 bits (84), Expect = 4e-12 Identities = 75/96 (78%), Gaps = 13/96 (14%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG--GC-GTAA----------GCCTGCT 79 ||||||||| ||||| |||||||||||||||| | || |||| ||||||| Sbjct 32 GTCCTATTCCATTATCCCATGCTAATGTATTCTGTGGCAGTAATAAAATATCTGCCTGCT 91 Query 80 TTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 ||||||||||||||||| ||| |||||| | |||| Sbjct 92 TTGAACACTCTAATTTTTTCACGGTAAACGATCTGG 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594578921076