Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20divionensis_20[genbank_20GCA_5F000826405.1_202015-01- 07] 107,714 sequences; 84,769,362 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq83316 82.4 8e-14 seq28846 82.4 8e-14 seq95863 78.8 1e-12 seq89108 78.8 1e-12 seq76132 78.8 1e-12 seq71148 78.8 1e-12 seq69065 78.8 1e-12 seq65565 78.8 1e-12 seq59638 78.8 1e-12 seq50311 78.8 1e-12 seq36736 78.8 1e-12 seq30769 78.8 1e-12 seq24090 78.8 1e-12 seq8674 78.8 1e-12 seq5709 78.8 1e-12 seq35167 75.2 1e-11 seq58222 73.4 4e-11 seq57711 73.4 4e-11 seq23689 73.4 4e-11 seq22017 73.4 4e-11 >seq83316 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 51 GTAATGATTAATATGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 110 Query 183 GGATTTAT 190 |||||||| Sbjct 111 GGATTTAT 118 >seq28846 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 18 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCATAGGTGAAATTCTT 77 Query 183 GGATTTAT 190 |||||||| Sbjct 78 GGATTTAT 85 >seq95863 Length=10011 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| |||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 2473 GTAATGATTAATAGAGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 2414 Query 183 GGATTTAT 190 |||||||| Sbjct 2413 GGATTTAT 2406 >seq89108 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| |||| | | |||| |||||||| ||||||||||||| Sbjct 42 GTAATGATTAATAGGGATAGTTTGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 101 Query 183 GGATTTAT 190 |||||||| Sbjct 102 GGATTTAT 109 >seq76132 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||| | ||||||||||||| Sbjct 108 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTAAGAGGTGAAATTCTT 49 Query 183 GGATTTAT 190 |||||||| Sbjct 48 GGATTTAT 41 >seq71148 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| | ||| | | |||| |||||||| ||||||||||||| Sbjct 87 GTAATGATTAATAGGGATAGTTGTGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 28 Query 183 GGATTTAT 190 |||||||| Sbjct 27 GGATTTAT 20 >seq69065 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 4 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 63 Query 183 GGATTTAT 190 ||||||| Sbjct 64 TGATTTAT 71 >seq65565 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| |||| |||||||| Sbjct 13 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTTAAATTCTT 72 Query 183 GGATTTAT 190 |||||||| Sbjct 73 GGATTTAT 80 >seq59638 Length=66 Score = 78.8 bits (86), Expect = 1e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||||| Sbjct 66 AATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGG 7 Query 185 ATTTAT 190 |||||| Sbjct 6 ATTTAT 1 >seq50311 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 ||||| || |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 59 GTAATTATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 118 Query 183 GGATTTAT 190 |||||||| Sbjct 119 GGATTTAT 126 >seq36736 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| | ||||||||||| Sbjct 16 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGATGTGAAATTCTT 75 Query 183 GGATTTAT 190 |||||||| Sbjct 76 GGATTTAT 83 >seq30769 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| | ||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 49 GTAATGATTAATAGGTATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 108 Query 183 GGATTTAT 190 |||||||| Sbjct 109 GGATTTAT 116 >seq24090 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||| | | | |||| |||||||| ||||||||||||| Sbjct 39 GTAATGATTAATAGGGATAGTTGGGTGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 98 Query 183 GGATTTAT 190 |||||||| Sbjct 99 GGATTTAT 106 >seq8674 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| || || | | |||| |||||||| ||||||||||||| Sbjct 40 GTAATGATTAATAGGGATAGTTGGTGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 99 Query 183 GGATTTAT 190 |||||||| Sbjct 100 GGATTTAT 107 >seq5709 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| |||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 50 GTAATGATTAATAGTGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 109 Query 183 GGATTTAT 190 |||||||| Sbjct 110 GGATTTAT 117 >seq35167 Length=127 Score = 75.2 bits (82), Expect = 1e-11 Identities = 55/64 (86%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||||||| ||||| | | |||| |||||||| |||||||||||||||||| Sbjct 1 GATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGGATT 60 Query 188 TATT 191 |||| Sbjct 61 TATT 64 >seq58222 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||||| Sbjct 65 AATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGG 124 Query 185 ATT 187 ||| Sbjct 125 ATT 127 >seq57711 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||||| Sbjct 65 AATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGG 124 Query 185 ATT 187 ||| Sbjct 125 ATT 127 >seq23689 Length=64 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||||||| ||||| | | |||| |||||||| |||||||||||||||||| Sbjct 64 GATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGGATT 5 Query 188 TAT 190 ||| Sbjct 4 TAT 2 >seq22017 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 65 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 124 Query 183 GGA 185 ||| Sbjct 125 GGA 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511465738560