Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20divionensis_20[genbank_20GCA_5F000826405.1_202015-01- 07] 107,714 sequences; 84,769,362 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq102826 89.7 1e-15 seq98025 89.7 1e-15 >seq102826 Length=10767 Score = 89.7 bits (98), Expect = 1e-15 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 170 AGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCC 229 ||||| || |||||||| | ||| || | ||| ||||||||||| || || |||||| || Sbjct 7557 AGGCCATCTTCGCCCCATCTGTATGCTCTGCTTCGTGCATGGTCGTGAGGAAAGTAGCCC 7498 Query 230 CAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGG 289 |||||||| |||| | || || || | ||| |||||||| || || || |||| Sbjct 7497 CAGGCGTCTCCATTTGGAGAATAATCCTCTCTCACGGTGCCCCACTGTCGATCAGACAGG 7438 Query 290 TAGGGGCCCCAC 301 || || |||||| Sbjct 7437 TAAGGCCCCCAC 7426 >seq98025 Length=4277 Score = 89.7 bits (98), Expect = 1e-15 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 170 AGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCC 229 ||||| || |||||||| | ||| || | ||| ||||||||||| || || |||||| || Sbjct 3211 AGGCCATCTTCGCCCCATCTGTATGCTCTGCTTCGTGCATGGTCGTGAGGAAAGTAGCCC 3270 Query 230 CAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGG 289 |||||||| |||| | || || || | ||| |||||||| || || || |||| Sbjct 3271 CAGGCGTCTCCATTTGGAGAATAATCCTCTCTCACGGTGCCCCACTGTCGATCAGACAGG 3330 Query 290 TAGGGGCCCCAC 301 || || |||||| Sbjct 3331 TAAGGCCCCCAC 3342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1006914242880