Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq25657 194 3e-47 seq13935 96.9 5e-18 seq2122 96.9 5e-18 >seq25657 Length=3011 Score = 194 bits (214), Expect = 3e-47 Identities = 130/141 (92%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct 1496 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1439 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119 ||||||||||| ||| |||| |||||||||||||||| |||||| |||||| |||||||| Sbjct 1438 CTCGTTGAAGATCAATAATTACAATGATCTATCCCCAGCACGATTAAATTTGCAAAGATT 1379 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||||||||| |||||| ||| Sbjct 1378 ACCCGGACCTATCGGCCCAGG 1358 Score = 140 bits (154), Expect = 5e-31 Identities = 85/89 (96%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 146 GACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 205 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1294 GACTCGTTGGATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1235 Query 206 ACCTGTTATTGCCTCAAACTTCCG-TGGC 233 |||||||||||||||||||||||| |||| Sbjct 1234 ACCTGTTATTGCCTCAAACTTCCGCTGGC 1206 >seq13935 Length=65 Score = 96.9 bits (106), Expect = 5e-18 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64 |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 1 AAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTCCTCG 58 Query 65 TTGAA 69 ||||| Sbjct 59 TTGAA 63 >seq2122 Length=65 Score = 96.9 bits (106), Expect = 5e-18 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64 |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 63 AAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTCCTCG 6 Query 65 TTGAA 69 ||||| Sbjct 5 TTGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751809220420