Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq25657 226 5e-57 seq25656 78.8 2e-12 >seq25657 Length=3011 Score = 226 bits (250), Expect = 5e-57 Identities = 217/274 (79%), Gaps = 22/274 (8%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-------TTTGCT--- 115 |||| | ||||| |||||||||||||||||||||||||||| ||| || Sbjct 337 CCAGATCGTTTACCGTGAAAAAATTAGAGTGTTCAAAGCAGGCAGATTCAATTTTCTGCC 396 Query 116 --CGAATACATTAGCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTT--GTTGGTT 170 ||||||||||||||||| ||||| ||||||||| || | |||| || ||||||| Sbjct 397 ACCGAATACATTAGCATGGGATAATGGAATAGGACCCTGTCCTCCTATCTTCAGTTGGTT 456 Query 171 T-CT-----AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224 || |||| | ||||||||||||||||||||| ||||| | | |||| |||| Sbjct 457 AACTTGTAGAGGATCAGGGTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATT 516 Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 |||||||||||||||||||||||||| |||| ||||| |||||||||| | |||||| Sbjct 517 GTCAGAGGTGAAATTCTTGGATTTATGAAAGATTAACTTCTGCGAAAGCATCTGCCAAGG 576 Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||| |||||||||||||||| Sbjct 577 ATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 609 >seq25656 Length=1858 Score = 78.8 bits (86), Expect = 2e-12 Identities = 74/95 (78%), Gaps = 12/95 (13%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC-------CTTTGCT--- 115 |||| | ||||| |||||||||||||||||||||||||||| ||| || Sbjct 140 CCAGATCGTTTACCGTGAAAAAATTAGAGTGTTCAAAGCAGGCAGATTCAATTTTCTGCC 81 Query 116 --CGAATACATTAGCATGGAATAATAGAATAGGAC 148 ||||||||||||||||| ||||| ||||||||| Sbjct 80 ACCGAATACATTAGCATGGGATAATGGAATAGGAC 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914960327424