Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq11525 95.1 2e-17 >seq11525 Length=98 Score = 95.1 bits (104), Expect = 2e-17 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 14 CACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTT 73 ||||||||||| ||||| || ||||||||| |||| ||| ||| | |||||||||| Sbjct 3 CACCGGGCAGGTGTCAGACCCTATACATCGTTTTACAA-CTTAGCAGAGTCCTGTGTTTT 61 Query 74 TAGTAAACAGTCGCTTCCCTCTATTCT 100 ||||||||||||||| ||||||||||| Sbjct 62 TAGTAAACAGTCGCTACCCTCTATTCT 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694223833324