Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq24972 109 2e-21 seq8882 96.9 1e-17 >seq24972 Length=1084 Score = 109 bits (120), Expect = 2e-21 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 331 GGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAA 390 ||||||||||||| ||||||||| | ||||| | | |||| || || ||| | ||| | Sbjct 1084 GGGCTACACACGTACTACAATGGTAATTACAACGTGAAGCGTAAACGTGAGTTTTAGCTA 1025 Query 391 ATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGA 450 | | ||| || || ||||| |||| | |||| || |||| ||||||| ||| Sbjct 1024 AACATGAAAAATTAACCTTAGTTCTGATTATTCTCTGTAAGTCGAGAGTATGAAGTAGGA 965 Query 451 ATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTC 493 |||||||||||||||||| || | ||| |||||||||| ||| Sbjct 964 ATCGCTAGTAATCGTAGAATAGAACGCTGCGGTGAATACATTC 922 >seq8882 Length=185 Score = 96.9 bits (106), Expect = 1e-17 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||||||||||||| |||||||||| || |||||| | | ||||||||||| || Sbjct 38 TACGACCGCAAGGTTAAAACTCAAAGAAACTGACGGAAGATTGTATAAGCGGTGGAGTAT 97 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG 103 ||||||||||| || ||||| ||||| |||||||| |||| Sbjct 98 GTGGTTTAATTTGATATAACGCAAAGAATCTTACCAACCCTTG 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503606132480