Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq25074 360 3e-97 seq3320 91.5 3e-16 seq3248 86.0 1e-14 >seq25074 Length=4993 Score = 360 bits (398), Expect = 3e-97 Identities = 243/275 (88%), Gaps = 13/275 (5%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 956 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 1015 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 1016 TAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGAC 1075 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1076 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 1135 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA-------------GGGACTAA 258 |||||||||||||||| |||||||||| |||||| || | |||| Sbjct 1136 TGTGGTAACTTTTCTGACACCTCTAGCTTCAAATCCGGAAATAAAAAAAAACGACTCTAA 1195 Query 259 AGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||||||||||| |||||| |||||||||| Sbjct 1196 AGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 1230 >seq3320 Length=118 Score = 91.5 bits (100), Expect = 3e-16 Identities = 83/107 (78%), Gaps = 12/107 (11%) Strand=Plus/Minus Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA-------- 250 ||||||||||||||||||||||||||||| |||||||||| |||||| || Sbjct 118 AGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATCCGGAAATAAAAA 59 Query 251 ----GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||||||||||||||||| |||||| |||||||||| Sbjct 58 AAACGACTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 12 >seq3248 Length=118 Score = 86.0 bits (94), Expect = 1e-14 Identities = 82/108 (76%), Gaps = 14/108 (13%) Strand=Plus/Plus Query 200 GCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA--------- 250 |||||||||||||||||||||||||||| |||||||||| |||||| || Sbjct 1 GCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATCCGGAAATAAAAAA 60 Query 251 -----GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||||||||||||||||| |||||| |||||||||| Sbjct 61 AAAACGACTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854176249728