Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq12149 102 9e-20 seq13598 96.9 4e-18 seq3226 86.0 7e-15 seq25002 75.2 1e-11 seq10012 75.2 1e-11 >seq12149 Length=90 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 18 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 77 Query 173 A 173 | Sbjct 78 A 78 >seq13598 Length=127 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 55 TACACCATTTATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 114 Query 173 A 173 | Sbjct 115 A 115 >seq3226 Length=84 Score = 86.0 bits (94), Expect = 7e-15 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 124 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2 TGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 51 >seq25002 Length=997 Score = 75.2 bits (82), Expect = 1e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT 158 |||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 355 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCT 400 >seq10012 Length=95 Score = 75.2 bits (82), Expect = 1e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT 158 |||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 46 TACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547061177412