Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq10824 96.9 6e-18 seq10924 84.2 4e-14 >seq10824 Length=455 Score = 96.9 bits (106), Expect = 6e-18 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| |||||| || ||||||||| Sbjct 139 CCACCTACGCACCCTTTACACCCAGTCAATGCGAATAACACTTGCCCTCTCCGTATTACC 80 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 79 GCGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 37 >seq10924 Length=189 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| | ||| || ||||||||| Sbjct 46 CCACCTACGCACCCTTTACACCCAGTCAATGCGAATAACACCAGCCCTCTCCGTATTACC 105 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 106 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828589736548