Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq25657 118 1e-24 >seq25657 Length=3011 Score = 118 bits (130), Expect = 1e-24 Identities = 153/207 (74%), Gaps = 22/207 (11%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-------TTTGCT--- 54 |||| | ||||| |||||||||||||| ||||||||||||| ||| || Sbjct 337 CCAGATCGTTTACCGTGAAAAAATTAGAGTGTTCAAAGCAGGCAGATTCAATTTTCTGCC 396 Query 55 --CGAATACATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTT--GTAGGTT 109 ||||||||||| ||||| ||||| ||||||||| || | |||| || || |||| Sbjct 397 ACCGAATACATTAGCATGGGATAATGGAATAGGACCCTGTCCTCCTATCTTCAGTTGGTT 456 Query 110 T-CT-----AGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAAT 163 || |||| | |||||||| |||| ||||||| ||||| | | |||| ||| Sbjct 457 AACTTGTAGAGGATCAGG-GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAAT 515 Query 164 TGTCAAAGGTGAAATTCTTGGATTTAT 190 ||||| ||||||||||||||||||||| Sbjct 516 TGTCAGAGGTGAAATTCTTGGATTTAT 542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511870107520