Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1058 105 1e-20 seq1506 91.5 2e-16 seq1278 77.0 5e-12 >seq1058 Length=94 Score = 105 bits (116), Expect = 1e-20 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 156 GACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAAT 215 ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| || ||||||| Sbjct 5 GACAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTAAT 64 Query 216 GGGCGAACAGCCCAACCCTTGGGACC 241 ||||||||||| ||||||||| ||| Sbjct 65 AGGCGAACAGCCTAACCCTTGGAACC 90 >seq1506 Length=122 Score = 91.5 bits (100), Expect = 2e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 188 CTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTC 247 || |||||| ||| ||| || ||||||| ||||||||||| ||||||||| ||| || | Sbjct 1 CTAAACCCAACTCACGTACCACTTTAATAGGCGAACAGCCTAACCCTTGGAACCGCCTGC 60 Query 248 AGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||| || ||| |||||||| Sbjct 61 AGCTCCAGGATGTGATGAGTCGACATCG 88 >seq1278 Length=263 Score = 77.0 bits (84), Expect = 5e-12 Identities = 81/104 (78%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 111 TCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCG 170 ||||||||||| || || | | |||| | |||| ||| | ||| |||||| |||| Sbjct 162 TCCTCTCGTACAAAAGAAACATTTTCTCGATTTTCG-ACGAA-ATGACAGATAGGAACCG 219 Query 171 AACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAA 214 ||||||||| ||||||||| |||||| ||| ||| || |||||| Sbjct 220 AACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTAA 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780601913968