Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq10924 136 1e-29 seq10824 131 5e-28 >seq10924 Length=189 Score = 136 bits (150), Expect = 1e-29 Identities = 125/152 (82%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 352 CGTAAAGCTC-TGTCCTCAAGGAAGATAATG--ACGGTACTTG-AGGAGGAAGCCCCGGC 407 |||||||||| | || |||||| |||||| | ||||||| ||||| |||||| | | Sbjct 185 CGTAAAGCTCGTTTCGCCAAGGATTATAATGCAATCGTACTTGGAGGAG-AAGCCCTGAC 127 Query 408 TAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGG 467 ||||| ||||||||||| |||||||||||| || ||||| | ||||| || | | ||| | Sbjct 126 TAACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGCTGGTGTTATTCGCATTGACT-G 68 Query 468 GGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 || |||||||||||||||||||||| |||||| Sbjct 67 GGTGTAAAGGGTGCGTAGGTGGTTTATTAAGT 36 >seq10824 Length=455 Score = 131 bits (144), Expect = 5e-28 Identities = 121/150 (81%), Gaps = 4/150 (3%) Strand=Plus/Plus Query 353 GTAAAGCTC-TGTCCTCAAGGAAGATAATG--ACGGTACTTGAGGAGGAAGCCCCGGCTA 409 ||||| ||| | || ||||||| |||||| | |||||||| | ||||||| | ||| Sbjct 1 GTAAAACTCGTTTCGTCAAGGATTATAATGCAATCGTACTTGAAGGAGAAGCCCTGACTA 60 Query 410 ACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGG 469 ||| ||||||||||| |||||||||||| || |||| || ||||| || | | ||| ||| Sbjct 61 ACTTCGTGCCAGCAGTCGCGGTAATACGGAGAGGGCAAGTGTTATTCGCATTGACT-GGG 119 Query 470 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 ||||||||||||||||||| || |||||| Sbjct 120 TGTAAAGGGTGCGTAGGTGGCTTATTAAGT 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497207808512