Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq10754 93.3 1e-16 seq10929 91.5 5e-16 >seq10754 Length=115 Score = 93.3 bits (102), Expect = 1e-16 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 98 CGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAAC 157 |||||||| |||||| | ||| ||||||||| || | ||||||||||||||||| | Sbjct 111 CGAACCCATGTATGTTGCATAATACCGGGATGAGCGGTAGCTAGGGGTGAAAGGCTAATC 52 Query 158 AAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || ||| | ||||| || |||| ||||| |||||||||||| || Sbjct 51 AAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTAGAGC 6 >seq10929 Length=127 Score = 91.5 bits (100), Expect = 5e-16 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 89 CTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAA 148 ||| ||| |||||||| |||||| | ||| ||||||||| || | |||||| ||| Sbjct 8 CTGAAGGATCGAACCCATGTATGTTGCATAATACCGGGATGAGCGGTAGCTAGGGGGGAA 67 Query 149 AGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||||||| ||| ||| | ||||| || |||| ||||| |||||||||||| || Sbjct 68 AGGCTAATCAAGCTTAGTGTTAGCTAGTACTCTACGAAATCTATTTAGGTAGAGC 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689157527552