Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq12149 118 4e-24 seq13598 116 1e-23 seq3226 104 8e-20 seq10012 95.1 4e-17 seq25002 91.5 5e-16 >seq12149 Length=90 Score = 118 bits (130), Expect = 4e-24 Identities = 77/85 (91%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 ||||| |||| ||||||||| |||||| |||||||||||||| ||||||||||||||||| Sbjct 1 GACAGTAGGGAAGTCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTC 60 Query 433 GCTACCTTAGGATGGTTATAGTTAC 457 |||||||||||| ||||| ||||| Sbjct 61 GCTACCTTAGGACCGTTATGGTTAC 85 >seq13598 Length=127 Score = 116 bits (128), Expect = 1e-23 Identities = 78/87 (90%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 ||||||| |||| ||||||||| ||||| |||||||||||||| ||||||||||||||| Sbjct 36 GAGACAGTAGGGAAGTCGTTACACCATTTATGCAGGTCGGAACTCACCCGACAAGGAATT 95 Query 431 TCGCTACCTTAGGATGGTTATAGTTAC 457 |||||||||||||| ||||| ||||| Sbjct 96 TCGCTACCTTAGGACCGTTATGGTTAC 122 >seq3226 Length=84 Score = 104 bits (114), Expect = 8e-20 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 401 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCAC 460 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| | Sbjct 2 TGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGC 61 Query 461 CGCCGTTTACTG 472 |||||||||||| Sbjct 62 CGCCGTTTACTG 73 >seq10012 Length=95 Score = 95.1 bits (104), Expect = 4e-17 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 ||||||| |||| ||||||||| |||||| |||||||||||||| ||||||||||||||| Sbjct 65 GAGACAGTAGGGAAGTCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATT 6 Query 431 TCGCT 435 ||||| Sbjct 5 TCGCT 1 >seq25002 Length=997 Score = 91.5 bits (100), Expect = 5e-16 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 ||||| |||| ||||||||| |||||| |||||||||||||| ||||||||||||||||| Sbjct 338 GACAGTAGGGAAGTCGTTACACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTC 397 Query 433 GCT 435 ||| Sbjct 398 GCT 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701954175488