Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20healyi_20[genbank_20GCA_5F000826305.1_202015-01-07] 26,188 sequences; 75,318,243 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq25656 466 5e-129 >seq25656 Length=1858 Score = 466 bits (516), Expect = 5e-129 Identities = 443/571 (78%), Gaps = 69/571 (12%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAA-GAGC-CCTGTATCAGTATTTATTGTCACTAC 58 |||||||||||||||||||||| | | |||| ||||||| |||||||||||||||| Sbjct 482 GTACTCATTCCAATTACAAGACTCTTATCGAGCGCCTGTATTGTTATTTATTGTCACTAC 541 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 542 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGAAGTGGTAGCCA 601 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 602 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTACGACCATGG 661 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG- 237 |||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 662 TAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAATCGTCGCCGC 721 Query 238 --GCTCAAGG-------CCATGCGATTCGTTA-AGTTATTATGAATCACC--AAGGAGCC 285 | ||||| ||||||| || | ||||| ||||||||||| | || Sbjct 722 CCCCACAAGGAGGGCATGAATGCGATCCGAAAGAGTTACTATGAATCACCAGATTGATTG 781 Query 286 CCGAAGGGCGTTGGTT-TTTTATCTAATAAATACACCCCT-------------------- 324 || || ||||| ||| | |||||||||||| |||| Sbjct 782 TTAAAATGC--TGGTTGTTTAACCTAATAAATACATCCCTCTGCGCATGCAAGGATAGAA 839 Query 325 ----------------TCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCA 368 |||| ||||| || ||||||||||||||||||||||||| Sbjct 840 CCGTGAAGCCCTACCCTCCGCGCTCGGGACCTTGCGCATGTATTAGCTCTAGAATTACCA 899 Query 369 CGGTTATCCATGTAG--------------TAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||| |||| ||| || ||||||||||| |||||||||| Sbjct 900 CGGTTATCCAAGTAGGTAAAAAGAAGAACAAAGAGACCATCAAATAAACTATAACTGATT 959 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTA 473 ||||||||||| |||||| || | ||||| | |||||||||||||||||||||||||| Sbjct 960 TAATGAGCCATCCGCAGTCTCGCCGTATAAACAAGCTTATACTTAGACATGCATGGCTTA 1019 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| Sbjct 1020 ATCTTTGAGACAAGCATATGACTACTGGCAG 1050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510004456448