Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq19968 77.0 3e-12 seq32604 75.2 1e-11 seq54715 73.4 4e-11 seq52433 73.4 4e-11 seq51714 73.4 4e-11 seq48265 73.4 4e-11 seq47901 73.4 4e-11 seq44924 73.4 4e-11 seq23587 73.4 4e-11 seq14204 73.4 4e-11 seq9224 73.4 4e-11 seq8859 73.4 4e-11 seq6672 73.4 4e-11 seq6199 73.4 4e-11 >seq19968 Length=127 Score = 77.0 bits (84), Expect = 3e-12 Identities = 65/80 (81%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 120 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACGATGTATAGGGTATGA 61 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 60 CACCTGCCCGGTGCTGAAAG 41 >seq32604 Length=127 Score = 75.2 bits (82), Expect = 1e-11 Identities = 61/74 (82%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 75 GCGACTGTTTAATAAAAACACAGGACTCTGCTAAGTTGTAAAACGATGTATAGGGTCTGA 16 Query 128 CGCCTGCCCGGTGC 141 | |||||||||||| Sbjct 15 CACCTGCCCGGTGC 2 >seq54715 Length=106 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || |||||||| ||| Sbjct 90 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACGATATATAGGGTCTGA 31 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 30 CACCTGCCCGGTGCTGAAAG 11 >seq52433 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||| || | || || ||||||||| ||| Sbjct 94 GCGACTGTTTACTAAAAACACAGGACTCTGATAAGTTGTAAAACGATGTATAGGGTCTGA 35 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 34 CACCTGCCCGGTGCTGAAAG 15 >seq51714 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || | ||||||||| ||| Sbjct 20 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACTATGTATAGGGTCTGA 79 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 80 CACCTGCCCGGTGCTGAAAG 99 >seq48265 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || |||||| || ||| Sbjct 11 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACGATGTATAGTGTCTGA 70 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 71 CACCTGCCCGGTGCTGAAAG 90 >seq47901 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||| || ||||||| || | || || ||||||||| ||| Sbjct 84 GCGACTGTTTACTAAAAACAAAGGACTCTGCTAAGTTGTAAAACGATGTATAGGGTCTGA 25 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 24 CACCTGCCCGGTGCTGAAAG 5 >seq44924 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || |||||||| ||| Sbjct 17 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACGATTTATAGGGTCTGA 76 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 77 CACCTGCCCGGTGCTGAAAG 96 >seq23587 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||| ||| || | || || ||||||||| ||| Sbjct 91 GCGACTGTTTACTAAAAACACAGGACTATGCTAAGTTGTAAAACGATGTATAGGGTCTGA 32 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 31 CACCTGCCCGGTGCTGAAAG 12 >seq14204 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| | | Sbjct 6 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACGATGTATAGGGTCTTA 65 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 66 CACCTGCCCGGTGCTGAAAG 85 >seq9224 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||| || ||||||| || | || || ||||||||| ||| Sbjct 44 GCGACTGTTTACTAAAAACATAGGACTCTGCTAAGTTGTAAAACGATGTATAGGGTCTGA 103 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 104 CACCTGCCCGGTGCTGAAAG 123 >seq8859 Length=87 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 84 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACGATGTATAGGGTCTGA 25 Query 128 CGCCTGCCCGGTGCCGGAAG 147 |||||||||||| | ||| Sbjct 24 AACCTGCCCGGTGCTGAAAG 5 >seq6672 Length=106 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || || ||||| ||| ||| Sbjct 12 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTTGTAAAACGATGTATATGGTCTGA 71 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 72 CACCTGCCCGGTGCTGAAAG 91 >seq6199 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||||| ||||||| || | || || ||||||||| ||| Sbjct 42 GCGACTGTTTACTAAAAACACATGACTCTGCTAAGTTGTAAAACGATGTATAGGGTCTGA 101 Query 128 CGCCTGCCCGGTGCCGGAAG 147 | |||||||||||| | ||| Sbjct 102 CACCTGCCCGGTGCTGAAAG 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476434877288