Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq32341 96.9 6e-18 seq37957 91.5 2e-16 seq14771 89.7 9e-16 seq60452 87.8 3e-15 seq59805 87.8 3e-15 seq59263 87.8 3e-15 seq58559 87.8 3e-15 seq48732 87.8 3e-15 seq30876 87.8 3e-15 seq18728 87.8 3e-15 seq12877 87.8 3e-15 seq9558 87.8 3e-15 seq14772 86.0 1e-14 seq3176 86.0 1e-14 seq61015 84.2 4e-14 seq24988 84.2 4e-14 seq24209 84.2 4e-14 seq20763 84.2 4e-14 seq61209 80.6 4e-13 seq58015 80.6 4e-13 seq49137 80.6 4e-13 seq34748 80.6 4e-13 seq21177 80.6 4e-13 seq13409 80.6 4e-13 seq10525 77.0 5e-12 seq33447 75.2 2e-11 seq43888 73.4 7e-11 seq20753 73.4 7e-11 seq8728 73.4 7e-11 >seq32341 Length=127 Score = 96.9 bits (106), Expect = 6e-18 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || ||| |||||||||||| Sbjct 114 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTACGTATTACC 55 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 54 GCGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 12 >seq37957 Length=127 Score = 91.5 bits (100), Expect = 2e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| ||||| || ||||| || ||| || ||||||||| Sbjct 90 CCACCTACGCACCCTTTACACCCAGTAAATACGAATAACACTAGCCCTCTCCGTATTACC 31 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCT 277 ||| ||||||||||| |||||| | |||| Sbjct 30 GCGACTGCTGGCACGAAGTTAGTCAGGGCT 1 >seq14771 Length=103 Score = 89.7 bits (98), Expect = 9e-16 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || |||| || ||||||||| Sbjct 86 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCATCTCCGTATTACC 27 Query 248 GCGGCTGCTGGCACGTAGTTAG 269 ||| ||||||||||| |||||| Sbjct 26 GCGACTGCTGGCACGAAGTTAG 5 >seq60452 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || ||| | ||||||||| Sbjct 112 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTATCCGTATTACC 53 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 52 GCGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 10 >seq59805 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 3 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 62 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | | ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 63 GTGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 105 >seq59263 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || ||| || |||||||| Sbjct 115 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCAGTATTACC 56 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 55 GCGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 13 >seq58559 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 4 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 63 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 || ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 64 ACGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 106 >seq48732 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || || || ||||||||| Sbjct 109 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCACTCTCCGTATTACC 50 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 49 GCGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 7 >seq30876 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || ||| || |||||||| Sbjct 123 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACA 64 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 63 GCGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 21 >seq18728 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 2 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 61 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 || ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 62 GCTACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 104 >seq12877 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || ||| || |||||||| Sbjct 115 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCTGTATTACC 56 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 55 GCGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 13 >seq9558 Length=127 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| || ||||| || || || ||||||||| Sbjct 21 CCACCTACGCACCCTTTACACCCAGTCAATACGAATAACACTATCCCTCTCCGTATTACC 80 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||||||| |||||| | ||||| | | ||| ||| Sbjct 81 GCGACTGCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 123 >seq14772 Length=103 Score = 86.0 bits (94), Expect = 1e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||| | | ||| || ||||| || |||| || ||||||||| Sbjct 86 CCACCTACGCACCCTTTACACCAAGTCAATACGAATAACACTAGCCATCTCCGTATTACC 27 Query 248 GCGGCTGCTGGCACGTAGTTAG 269 ||| ||||||||||| |||||| Sbjct 26 GCGACTGCTGGCACGAAGTTAG 5 >seq3176 Length=127 Score = 86.0 bits (94), Expect = 1e-14 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 ||||| | ||||||||||||| | ||| || ||||| || ||| || |||||||||||| Sbjct 1 CCTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCG 60 Query 251 GCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 || |||||||| |||||| | ||||| | | ||| ||| Sbjct 61 ACTTCTGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 100 >seq61015 Length=127 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| | ||||| || ||| || ||||||||| Sbjct 32 CCACCTACGCACCCTTTACACCCAGTCAATACTAATAACACTAGCCCTCTCCGTATTACC 91 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 92 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 122 >seq24988 Length=127 Score = 84.2 bits (92), Expect = 4e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 192 CTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGG 251 |||| | ||||||||||||| | ||| || ||||| || ||| || |||||||||||| Sbjct 127 CTACGCACCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGA 68 Query 252 CTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||||| |||||| | ||||| | | ||| ||| Sbjct 67 CTGATGGCACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 29 >seq24209 Length=127 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| | ||||| || ||| || ||||||||| Sbjct 96 CCACCTACGCACCCTTTACACCCAGTCAATACAAATAACACTAGCCCTCTCCGTATTACC 37 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 36 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 6 >seq20763 Length=127 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||||||||| | ||| | ||||| || ||| || ||||||||| Sbjct 33 CCACCTACGCACCCTTTACACCCAGTCAATATGAATAACACTAGCCCTCTCCGTATTACC 92 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||| ||||||||||| |||||| | ||||| Sbjct 93 GCGACTGCTGGCACGAAGTTAGTCAGGGCTT 123 >seq61209 Length=127 Score = 80.6 bits (88), Expect = 4e-13 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258 ||||||||||||| | ||| || ||||| || ||| || |||||||||||| ||||||| Sbjct 124 CCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCTGG 65 Query 259 CACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| |||||| | ||||| | | ||| ||| Sbjct 64 AACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 33 >seq58015 Length=127 Score = 80.6 bits (88), Expect = 4e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | |||||||||| || | ||| || ||||| || ||| || ||||||||| Sbjct 85 CCACCTACGCACCCTTTACACACAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 26 Query 248 GCGGCTGCTGGCACGTAGTTAG 269 ||| ||||||||||| |||||| Sbjct 25 GCGACTGCTGGCACGAAGTTAG 4 >seq49137 Length=127 Score = 80.6 bits (88), Expect = 4e-13 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258 ||||||||||||| | ||| || ||||| || ||| || |||||||||||| ||||| | Sbjct 6 CCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCTTG 65 Query 259 CACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||| |||||| | ||||| | | ||| ||| Sbjct 66 CACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 97 >seq34748 Length=127 Score = 80.6 bits (88), Expect = 4e-13 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258 ||||||||||||| | ||| || ||||| || ||| || |||||||||||| |||||| Sbjct 5 CCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCTGT 64 Query 259 CACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||| |||||| | ||||| | | ||| ||| Sbjct 65 CACGAAGTTAGTCAGGGCTTCTCCTTCAAGTA 96 >seq21177 Length=127 Score = 80.6 bits (88), Expect = 4e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | ||||||| ||||| | ||| || ||||| || ||| || ||||||||| Sbjct 46 CCACCTACGCACCCTTTATACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 105 Query 248 GCGGCTGCTGGCACGTAGTTAG 269 ||| ||||||||||| |||||| Sbjct 106 GCGACTGCTGGCACGAAGTTAG 127 >seq13409 Length=127 Score = 80.6 bits (88), Expect = 4e-13 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258 ||||||||||||| | ||| || ||||| || ||| || |||||||||||| ||||||| Sbjct 1 CCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCTGG 60 Query 259 CACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| |||||| | ||||| | | ||| ||| Sbjct 61 CACTAAGTTAGTCAGGGCTTCTCCTTCAAGTA 92 >seq10525 Length=80 Score = 77.0 bits (84), Expect = 5e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 202 TTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCAC 261 |||||||||| | ||| || ||||| || ||| || |||||||||||| |||||||||| Sbjct 1 TTTACACCCAGTCAATTCGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCTGGCAC 60 Query 262 GTAGTTAGCCGTGGCTT 278 | |||||| | ||||| Sbjct 61 GAAGTTAGTCAGGGCTT 77 >seq33447 Length=76 Score = 75.2 bits (82), Expect = 2e-11 Identities = 59/71 (83%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258 ||||||||||||| | ||| || ||||| || ||| || |||||||||||| ||||||| Sbjct 75 CCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCTGG 16 Query 259 CACGTAGTTAG 269 || | |||||| Sbjct 15 CAAGAAGTTAG 5 >seq43888 Length=127 Score = 73.4 bits (80), Expect = 7e-11 Identities = 61/75 (81%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | | ||||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 76 CCACCTACGCACACTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 17 Query 248 GCGGCTGCTGGCACG 262 ||| ||||||||||| Sbjct 16 GCGACTGCTGGCACG 2 >seq20753 Length=127 Score = 73.4 bits (80), Expect = 7e-11 Identities = 61/75 (81%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| | || |||||||||| | ||| || ||||| || ||| || ||||||||| Sbjct 77 CCACCTACGCACCATTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACC 18 Query 248 GCGGCTGCTGGCACG 262 ||| ||||||||||| Sbjct 17 GCGACTGCTGGCACG 3 >seq8728 Length=66 Score = 73.4 bits (80), Expect = 7e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 197 CGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCT 256 ||||||||||||||| | ||| || ||||| || ||| || |||||||||||| ||||| Sbjct 2 CGCCCTTTACACCCAGTCAATACGAATAACACTAGCCCTCTCCGTATTACCGCGACTGCT 61 Query 257 GGCAC 261 ||||| Sbjct 62 GGCAC 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828165323608