Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq47849 75.2 8e-12 >seq47849 Length=127 Score = 75.2 bits (82), Expect = 8e-12 Identities = 87/115 (76%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||| ||| || |||||||||| || | | ||||||||||| ||| Sbjct 6 TACCTTTTATCCGTTAAGCAATAGCCCTTCCATACAGCACTATTGGATCACTATGGCCTA 65 Query 61 CTTTCGCATCTG-CTCTAGTTGTTGCTCT-CGCAATCAAGCACACTTTTGCCATT 113 |||||| |||| || | |||| ||| | || ||||||| ||| | ||||| Sbjct 66 CTTTCGTCTCTGAATCGATTTGTCAATCTACTCAGTCAAGCAACCTTATACCATT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351739141600