Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F000826285.1_202015-01- 07] 79,048 sequences; 66,025,675 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq46377 82.4 8e-14 seq25041 82.4 8e-14 seq20428 82.4 8e-14 seq18218 82.4 8e-14 seq62766 78.8 1e-12 seq56105 78.8 1e-12 seq46617 78.8 1e-12 seq45276 78.8 1e-12 seq42246 78.8 1e-12 seq34563 78.8 1e-12 seq25042 78.8 1e-12 seq19902 78.8 1e-12 seq16311 78.8 1e-12 seq15768 78.8 1e-12 seq11376 78.8 1e-12 seq4760 78.8 1e-12 seq29074 75.2 1e-11 seq53362 73.4 4e-11 seq12292 73.4 4e-11 >seq46377 Length=68 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 1 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 60 Query 183 GGATTTAT 190 |||||||| Sbjct 61 GGATTTAT 68 >seq25041 Length=79 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 3 GTAATGATTAATATGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 62 Query 183 GGATTTAT 190 |||||||| Sbjct 63 GGATTTAT 70 >seq20428 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 18 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCATAGGTGAAATTCTT 77 Query 183 GGATTTAT 190 |||||||| Sbjct 78 GGATTTAT 85 >seq18218 Length=127 Score = 82.4 bits (90), Expect = 8e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 91 GTAATGATTAATAGGGATAGTTGGGGGAATTAATATTTAATTGTCAGAGGTGAAATTCTT 32 Query 183 GGATTTAT 190 |||||||| Sbjct 31 GGATTTAT 24 >seq62766 Length=118 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| |||| | | |||| |||||||| ||||||||||||| Sbjct 42 GTAATGATTAATAGGGATAGTTTGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 101 Query 183 GGATTTAT 190 |||||||| Sbjct 102 GGATTTAT 109 >seq56105 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||| | ||||||||||||| Sbjct 108 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTAAGAGGTGAAATTCTT 49 Query 183 GGATTTAT 190 |||||||| Sbjct 48 GGATTTAT 41 >seq46617 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 4 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 63 Query 183 GGATTTAT 190 ||||||| Sbjct 64 TGATTTAT 71 >seq45276 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| | ||| | | |||| |||||||| ||||||||||||| Sbjct 41 GTAATGATTAATAGGGATAGTTGTGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 100 Query 183 GGATTTAT 190 |||||||| Sbjct 101 GGATTTAT 108 >seq42246 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 ||||| || |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 59 GTAATTATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 118 Query 183 GGATTTAT 190 |||||||| Sbjct 119 GGATTTAT 126 >seq34563 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| | ||||||||||| Sbjct 16 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGATGTGAAATTCTT 75 Query 183 GGATTTAT 190 |||||||| Sbjct 76 GGATTTAT 83 >seq25042 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 3 GTAATGATTAATATGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 62 Query 183 GGATTTAT 190 | |||||| Sbjct 63 GTATTTAT 70 >seq19902 Length=118 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| |||| | | |||| |||||||| ||||||||||||| Sbjct 42 GTAATGATTAATATGGATAGTTTGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 101 Query 183 GGATTTAT 190 |||||||| Sbjct 102 GGATTTAT 109 >seq16311 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||| | | | |||| |||||||| ||||||||||||| Sbjct 39 GTAATGATTAATAGGGATAGTTGGGTGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 98 Query 183 GGATTTAT 190 |||||||| Sbjct 99 GGATTTAT 106 >seq15768 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| || || | | |||| |||||||| ||||||||||||| Sbjct 40 GTAATGATTAATAGGGATAGTTGGTGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 99 Query 183 GGATTTAT 190 |||||||| Sbjct 100 GGATTTAT 107 >seq11376 Length=80 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 77 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 18 Query 183 GGATTTAT 190 ||||||| Sbjct 17 AGATTTAT 10 >seq4760 Length=127 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| |||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 50 GTAATGATTAATAGTGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 109 Query 183 GGATTTAT 190 |||||||| Sbjct 110 GGATTTAT 117 >seq29074 Length=127 Score = 75.2 bits (82), Expect = 1e-11 Identities = 55/64 (86%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||||||| ||||| | | |||| |||||||| |||||||||||||||||| Sbjct 1 GATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGGATT 60 Query 188 TATT 191 |||| Sbjct 61 TATT 64 >seq53362 Length=64 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||||||| ||||| | | |||| |||||||| |||||||||||||||||| Sbjct 1 GATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTTGGATT 60 Query 188 TAT 190 ||| Sbjct 61 TAT 63 >seq12292 Length=127 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | | |||| |||||||| ||||||||||||| Sbjct 65 GTAATGATTAATAGGGATAGTTGGGGGCATTAATATTTAATTGTCAGAGGTGAAATTCTT 124 Query 183 GGA 185 ||| Sbjct 125 GGA 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511607921920