Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002105255.1_202017-04- 21] 46,799 sequences; 74,697,533 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq41212 75.2 9e-12 seq39618 75.2 9e-12 >seq41212 Length=455 Score = 75.2 bits (82), Expect = 9e-12 Identities = 101/141 (72%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | |||| | ||| | | ||||| |||||||||| |||||| Sbjct 223 TCGAGTTGCAGAGAATAATCAGAACTGAGGTTAACTTTTAATGATTAGCTCCAGCTCGCG 282 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || | | |||| |||||||||| ||||||| ||||| ||| ||| ||||| Sbjct 283 CTCTTGCTTCACATTGTAGTTACCATTGTAGTACGTGTGTAGCCCAACCTATATAGGCCA 342 Query 121 TGAGGACTTGACGTCATCCCC 141 | | || ||||| || || || Sbjct 343 TAATGATTTGACTTCCTCTCC 363 >seq39618 Length=461 Score = 75.2 bits (82), Expect = 9e-12 Identities = 101/141 (72%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | |||| | ||| | | ||||| |||||||||| ||| || Sbjct 158 TCGAGTTGCAGAGAATAATCAGAACTGAGGTTAACTTTTAATGATTAGCTCCAGCTCACG 217 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || | | |||| |||||||||| ||||||| ||||| ||| ||| ||||| Sbjct 218 CTCTTGCTTCACATTGTAGTTACCATTGTAGTACGTGTGTAGCCCAACCTATATAGGCCA 277 Query 121 TGAGGACTTGACGTCATCCCC 141 | | || ||||| || ||||| Sbjct 278 TAATGATTTGACTTCCTCCCC 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415811400030