Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002105255.1_202017-04- 21] 46,799 sequences; 74,697,533 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq39220 73.4 8e-11 >seq39220 Length=459 Score = 73.4 bits (80), Expect = 8e-11 Identities = 107/148 (72%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT-TTGGACC 191 |||| || ||| |||||| | |||||||| |||||||||| | || || |||| || Sbjct 239 TCAGGCTTTCGCCCATTGTCAAATATTCCCCACTGCTGCC--CTTTAAAAGACTTGGGCC 182 Query 192 GTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGG 251 || | ||||| ||||||||| || | | |||||| | | ||| ||||||||||| | Sbjct 181 GTTT-TCAGTCCCAATGTGGCTGATCATTCTCTCAAACCAGCTAAGCATCGTAGGCTTGT 123 Query 252 TGGGCCGTTACCCCGCCTACTACCTAAT 279 || |||| | | |||||||||| Sbjct 122 TGAATAATTACTACAACAACTACCTAAT 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068299812288