Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq9739 143 5e-32 >seq9739 Length=644 Score = 143 bits (158), Expect = 5e-32 Identities = 163/218 (75%), Gaps = 27/218 (12%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC------TTTGCT---- 115 |||| | ||||| |||||||||||||||||||||||| ||| ||| || Sbjct 426 CCAGATCGTTTACCGTGAAAAAATTAGAGTGTTCAAAGCGGGCAGATATTTTTCCTGCCA 485 Query 116 -CGAATACATTAGCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTT--GTTGGTTT 171 ||||||||||||||||| ||||| ||||||||| || | ||||||| |||||||| Sbjct 486 CCGAATACATTAGCATGGGATAATGGAATAGGACCCTGACCTCCTATTTTCAGTTGGTTT 545 Query 172 ---------CTAGG----ACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 | ||| | | ||||||||||||||||||||| ||||| | | ||| Sbjct 546 TGTTTACAGCGAGGTTATATCAGGGTAATGATTAATAGGGATAGTTGGGGGCATTAATAT 605 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256 | |||||||||||||||||||||||||||||| |||| Sbjct 606 TTAATTGTCAGAGGTGAAATTCTTGGATTTATGAAAGA 643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915101680064