Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20lenticulata_20[genbank_20GCA_5F002179805.1_202017-06- 08] 10,743 sequences; 75,569,356 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq10422 233 3e-59 seq10541 226 5e-57 >seq10422 Length=470 Score = 233 bits (258), Expect = 3e-59 Identities = 166/192 (86%), Gaps = 9/192 (5%) Strand=Plus/Plus Query 111 CGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCA 170 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 CGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCG 60 Query 171 ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCA 230 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 61 ACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACA 120 Query 231 CCTCTAGCCTCAAATTTCG---------AGGGACTAAAGGATCGATAGGCCACACTTTCA 281 |||||||| |||||| || || ||||||||||||||||||| |||||| Sbjct 121 CCTCTAGCTTCAAATCCCGAAATAAAAAAGACTCTAAAGGATCGATAGGCCATGCTTTCA 180 Query 282 TGGTTTGTATTC 293 |||||||||| Sbjct 181 CAGTTTGTATTC 192 >seq10541 Length=912 Score = 226 bits (250), Expect = 5e-57 Identities = 133/138 (96%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 773 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 832 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 833 TAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGAC 892 Query 152 ATCGAAGGATCAAAAAGC 169 |||||||||||||||||| Sbjct 893 ATCGAAGGATCAAAAAGC 910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854308211808